| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2316 |
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| Symbol | flgD |
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| ID | 4604566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2782289 |
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| End bp | 2783017 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781713 |
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| Product | flagellar basal body rod modification protein |
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| Protein accession | YP_928191 |
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| Protein GI | 119775451 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1843] Flagellar hook capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.383064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTTTTC TTAACTCTAT CAGTCAGGCA TCGGCGGCCC AGTCAACCCA GAGCACGGGA
AATCCCTTTC TGGACAGTGT CAGGTTGCAG ACCAAAGAGG CAGTGCCAGA GGCTAAAAAG
CAGGAATTGA CTCAAGAGGA TTTTTTCGCC CTCTTGTCGC AGCAGTTGTC GATGCAGGAT
CCGTTCAAGC CGGTGGAAAA CGACCAGATG ATTGCCCAGA TGGCGTCATT CTCTACCGTG
GACGGTATCG CCAATCTGAA CGATCACATT GTGAATCTGA ATACCGTGAT GACCTCCAGC
CAGGCACTGC AGGCATCAGG GCTGGTTGGG CAGAAGGTAT TGATCCCATC GGCGTCTGGC
CATGTATCTG CTGAAGAGCC CAACCTAAAG GGTGTCATCA GCACCTCCAA GCCCATCGAG
ACAATCATGG TGCGCATTGA AGATGACAAG GGGCAGTTGG TGAAAACCTT CAGTGTGGAT
GGCAGTGACG GCGGCAACAT CGATGTGAAT TGGGATGGCC TCGATGCGGA AGGCAAGCCC
GTTGCCGATG GTACTTACAC CATCAAGGCC AGTGGCCGGG TCGATGGCAA GGCCGAGGAA
TTACCGGTTT CAACTTATGC CCACGTGACC AGCGTGTCGC TTGGGACAGC AGCAACAGGC
GCCATTCTGA ATTTGCGTGG CATTGGCGGC ATTAAACTAT CGGATGTTCT GGCTGTGGCT
GAGAGCTGA
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| Protein sequence | MSFLNSISQA SAAQSTQSTG NPFLDSVRLQ TKEAVPEAKK QELTQEDFFA LLSQQLSMQD
PFKPVENDQM IAQMASFSTV DGIANLNDHI VNLNTVMTSS QALQASGLVG QKVLIPSASG
HVSAEEPNLK GVISTSKPIE TIMVRIEDDK GQLVKTFSVD GSDGGNIDVN WDGLDAEGKP
VADGTYTIKA SGRVDGKAEE LPVSTYAHVT SVSLGTAATG AILNLRGIGG IKLSDVLAVA
ES
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