Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2259 |
Symbol | |
ID | 4604509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2722266 |
End bp | 2723222 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639781656 |
Product | MviM protein |
Protein accession | YP_928134 |
Protein GI | 119775394 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.127425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00202503 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAACT TTGCATTAAT CGGTGCTGCA GGATACATCG CACCTCGTCA CTTACGAGCA ATTAAAGATA CGGGTAATAA TTTGGTTGCT GCTATGGACA TCAATGATTC AGTCGGCATT ATGGATAGTC ATTTCCCAGA AGCAGAGTTT TTTACTGAAT TTGAAGACTT TACCGCATTT GTTGAAGATC AAGCGCTTAA AGGAAAGAAG TTAGATTATA TCTCAATTTG TAGCCCTAAT TATCTGCATG CGCCTCATAT GAAGTATGCG CTAAAAAACG GGATAGATGT AATCTGTGAA AAGCCATTAG TACTTCATTC CGAAGATATG GATGTACTCA AAGAGTATGA GCAAAAGTAT GGTGCAAAGG TAAACTCAAT TCTGCAATTG CGCCTACATC CGTCAATCAT TGCGCTGCGA GAAAAAGTAG CTGCCGCGCC AGCGGACAAA GTTTTTGATG TTGACCTAAC GTACATGACA TCTCGTGGCA AATGGTACAT GAAGTCATGG AAAGGGTTTG ACCACAAATC TGGGGGGGTT GCGACAAATA TTGGTGTGCA TTTCTATGAT ATGTTGCATT TCATCTTCGG GGATTTGAAA TGTAATGAAG TTCATTACAG AGACGAAAAA ACGGCTAGCG GTTACTTAGA GTATGAGCGT GCACGAGTAA AATGGTTCCT CTCTATTGAC GCAAATAACC TGCCTGATAA CGCGGTTCAG GGCGAAAAAT TAACCTACCG TAGTATCACA ATTAGTGACG GTGAAAATAC AGTAGAGCTT GAGTTTTCGG GCGGTTTCAC CGATTTACAT ACGGTCAGCT ATCAAAACGT ACTTGCGGGT AATGGTTTTG GTATCGATGA AAACCGTATC GCGATTGAGA CGGTAGAAAA TATCAGAACT CAGACTGTTA TAGCGGCCGG TGATAAAGCT CACCCATTGC TAACAAAGGT TTTGTAA
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Protein sequence | MKNFALIGAA GYIAPRHLRA IKDTGNNLVA AMDINDSVGI MDSHFPEAEF FTEFEDFTAF VEDQALKGKK LDYISICSPN YLHAPHMKYA LKNGIDVICE KPLVLHSEDM DVLKEYEQKY GAKVNSILQL RLHPSIIALR EKVAAAPADK VFDVDLTYMT SRGKWYMKSW KGFDHKSGGV ATNIGVHFYD MLHFIFGDLK CNEVHYRDEK TASGYLEYER ARVKWFLSID ANNLPDNAVQ GEKLTYRSIT ISDGENTVEL EFSGGFTDLH TVSYQNVLAG NGFGIDENRI AIETVENIRT QTVIAAGDKA HPLLTKVL
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