| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2250 |
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| Symbol | |
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| ID | 4604500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2713804 |
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| End bp | 2714535 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639781647 |
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| Product | acetoacetyl-CoA reductase |
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| Protein accession | YP_928125 |
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| Protein GI | 119775385 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.756191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00780881 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATACTA AAGCAGTCGT AGTTACAGGT GCCACAGGAG GAATTGGTTG GACTATTGCC
GAATACCTAA TGTCTCTTGA ATATTTCGTT ATCGGCACTA CCCATCGTGC TCCTCAATCA
GCCTGTGAAC AATGGATAGA AATGGCAGAT AAGAGAGGAG TGTTAATTAA ATACGACTCT
AACGTTGACA ACCTTTCAAT AGATACGTTA ATTGAGGTTG CTAACGGCCA CTCTATTTAT
GGATTAGTTA ATAATTTGGG GATCACACGA GATTCATCTT TTAAAAAGAT GACTTCTGAA
CAGTGGAAAC AAGTTATGGA TGTCAACTTG TTTTCCGTTT TTTCTTTAAC TCAATGCATT
TTTAATCATA TGGCTTTGTC AGGAAGTGGT AGAATCGTTA ATATTTCTTC GGTTAATGCA
CATAGAGGTC AGTTTGGTCA GGTTAATTAT TGTGCGGCTA AAGCTGGCTT GTTGGGTTTT
ACAAAGGCGC TTTCACTAGA GGGCGCTAAG TCTGGCATTA CTGTGAATAG CGTTTCACCT
GGATATACTG ATACTAAAAT GCTCTCGCAT ATTCCAACAG ATATTCTGCA GTCAATAAAA
GATTCAGTTC CGATGAAGCG CTTAGCCAAA CCTATCGAAA TTGCACATGC AGTTGCATTT
TTGTTAGACG ATAAGTCAGC TTATATCACA GGAGCGGACA TTCCTGTGAA TGGTGGATTG
CATTTATCAT GA
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| Protein sequence | MNTKAVVVTG ATGGIGWTIA EYLMSLEYFV IGTTHRAPQS ACEQWIEMAD KRGVLIKYDS
NVDNLSIDTL IEVANGHSIY GLVNNLGITR DSSFKKMTSE QWKQVMDVNL FSVFSLTQCI
FNHMALSGSG RIVNISSVNA HRGQFGQVNY CAAKAGLLGF TKALSLEGAK SGITVNSVSP
GYTDTKMLSH IPTDILQSIK DSVPMKRLAK PIEIAHAVAF LLDDKSAYIT GADIPVNGGL
HLS
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