Gene Sama_2184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2184 
Symbol 
ID4604434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2642265 
End bp2642654 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content54% 
IMG OID639781569 
Productphage shock protein E 
Protein accessionYP_928059 
Protein GI119775319 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0017776 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00888717 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACCCAC TGGCTAAAGT CGGGCAACTT GCCCTGATTG GTCTGATGCT GATACTGACA 
AGCACGTTGG CTATCGGACA GGACAAAGAT GCTGCCACCG CCTGGAAACT GATTGAACAG
GGCGCCATGC TGGTCGATGT ACGTACACCG GAAGAATATG CTGCAGGACA TATCGAAGGG
GCCATCAATA TTCCCTACGA GGAAGTCGCC GCTGAATTTG CCAAACGTGC CATCGACAAG
AACACTTCGG TGGTGCTCTA TTGTCGCAGC GGCAGACGCA GTGGTGTAGC CAATGAAGCC
CTGAACGCCG CTGGCTTTAC CCAGGTCTAC AACGGCGGTG GCTACGAGAC TTTGGCGCAA
TCGGGCAAAT CCGGGCAAAG CCAAAAGTAA
 
Protein sequence
MNPLAKVGQL ALIGLMLILT STLAIGQDKD AATAWKLIEQ GAMLVDVRTP EEYAAGHIEG 
AINIPYEEVA AEFAKRAIDK NTSVVLYCRS GRRSGVANEA LNAAGFTQVY NGGGYETLAQ
SGKSGQSQK