Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2184 |
Symbol | |
ID | 4604434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2642265 |
End bp | 2642654 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639781569 |
Product | phage shock protein E |
Protein accession | YP_928059 |
Protein GI | 119775319 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0017776 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00888717 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAACCCAC TGGCTAAAGT CGGGCAACTT GCCCTGATTG GTCTGATGCT GATACTGACA AGCACGTTGG CTATCGGACA GGACAAAGAT GCTGCCACCG CCTGGAAACT GATTGAACAG GGCGCCATGC TGGTCGATGT ACGTACACCG GAAGAATATG CTGCAGGACA TATCGAAGGG GCCATCAATA TTCCCTACGA GGAAGTCGCC GCTGAATTTG CCAAACGTGC CATCGACAAG AACACTTCGG TGGTGCTCTA TTGTCGCAGC GGCAGACGCA GTGGTGTAGC CAATGAAGCC CTGAACGCCG CTGGCTTTAC CCAGGTCTAC AACGGCGGTG GCTACGAGAC TTTGGCGCAA TCGGGCAAAT CCGGGCAAAG CCAAAAGTAA
|
Protein sequence | MNPLAKVGQL ALIGLMLILT STLAIGQDKD AATAWKLIEQ GAMLVDVRTP EEYAAGHIEG AINIPYEEVA AEFAKRAIDK NTSVVLYCRS GRRSGVANEA LNAAGFTQVY NGGGYETLAQ SGKSGQSQK
|
| |