| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2134 |
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| Symbol | trpA |
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| ID | 4604384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2579988 |
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| End bp | 2580788 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639781519 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_928009 |
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| Protein GI | 119775269 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.713088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAT ATTCGAACGC CTTTGCCCGC TTAAAAGCCG GATCACGGGG CGCCTTCGTG
CCTTTCGTCA CCCTGGGTGA CCCAGGCATC GACGAGAGTC TCGCGATTAT TGATGCCCTG
GTTGAAGGCG GCGCCGATTG TCTTGAGCTG GGCTTTCCCT TCTCAGACCC ACTCGCCGAT
GGCCCGGTGA TCCAGGGCGC CAATATCCGC GCCTTGGCCG CCGGAACAAC CCCGGATACC
TGTTTCAAGA TGATTGAGCA AATCCGCGCC AAGTATCCCG AACTGCCCAT TGGCCTCTTG
CTGTACGCCA ATTTGGTATT TGCCAATGGC ATAGAAGCCT TCTACCAACG CGCCAAGGCT
GCCGGGGTCG ATTCTGTGCT GATTGCCGAT GTGCCGGCAG AAGAGTCAGC GCCTTTCGTT
GCCGCCGCCA GGGCCGAAGG CATAGCGCCG ATTTTTATCG CGCCCCCAAA TGCCAGCGCC
GACACCCTGC GACTGGTCGC GTCCCTTGGG GAAGGTTACA CCTACCTCTT GTCCCGCGCC
GGAGTGACAG GCGCCGACAA CAAAGCCGGT ATGCCACTGG ACTCGGTACT ATCGGCCCTG
AAGGAATTCA ACGCGCCTCC ACCGCTGCTG GGATTTGGCA TTGCCGAACC TTCACAGGTT
CAGGAAGCGA TTGCTGCCGG GGCAGCCGGT GCCATTTCCG GCTCCGCGGT AGTCAAGCGT
ATCGAAGCCT TAAAGGACGA TATGCCCAAG CTCCTGACTG AACTCAAGTC CTTTGCCAGC
GCCATGAAGG CAGCCACCTG A
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| Protein sequence | MNRYSNAFAR LKAGSRGAFV PFVTLGDPGI DESLAIIDAL VEGGADCLEL GFPFSDPLAD
GPVIQGANIR ALAAGTTPDT CFKMIEQIRA KYPELPIGLL LYANLVFANG IEAFYQRAKA
AGVDSVLIAD VPAEESAPFV AAARAEGIAP IFIAPPNASA DTLRLVASLG EGYTYLLSRA
GVTGADNKAG MPLDSVLSAL KEFNAPPPLL GFGIAEPSQV QEAIAAGAAG AISGSAVVKR
IEALKDDMPK LLTELKSFAS AMKAAT
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