| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2133 |
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| Symbol | |
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| ID | 4604383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2578783 |
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| End bp | 2579976 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639781518 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_928008 |
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| Protein GI | 119775268 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.31152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.733883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC TGAAACTCGA TCCCTACTTC GGCGAATACG GCGGTATGTA CGTGCCGCAA
ATTCTGATGC CGGCGCTGAA GCAACTGGAG ACCGCCTTTG TTGAGGCCCA GCAAGACCCA
GAGTTCTTAA CAGAATTCCA CGACCTGTTG AAAAACTATG CGGGCCGCCC CACCGCCTTA
ACCTTGACCC GTAATCTGTC TCCCAATCCC AAGGTGAAAA TCTACTTAAA GCGTGAGGAC
CTGCTGCACG GCGGTGCCCA CAAGACCAAT CAGGTGCTAG GTCAGGCGCT GCTTGCCAAA
CGCATGGGCA AGAAAGAGAT TATTGCCGAG ACAGGCGCCG GGCAACACGG TGTGGCCACA
GCGCTGGCTT GCGCCCTGTT GGGGCTCAAG TGCAAGGTAT ACATGGGTGC CAAAGACGTA
GCCCGCCAGA GCCCCAATGT GTTTCGTATG CGTTTGATGG GCGCGGAGGT TATCCCGGTC
ACCTCCGGCT CTGCCACCCT CAAGGATGCC TGTAACGAGG CCATGCGTGA CTGGTCCGGC
AGCTACGACC GCGCCCACTA TTTGCTGGGT ACTGCCGCAG GGCCTCATCC CTTCCCCACC
ATAGTACGGG AATTCCAGCG CATGATTGGC GCCGAAACAA AAGCCCAAAT GTTGGAGAAA
GAAGGCCGCC TGCCGGATGC CGTTATCGCC TGCGTGGGTG GCGGCTCCAA CGCCATCGGT
ATGTTTGCTG ACTTTATCGA CGAACCTTCG GTGAAGCTTA TTGGGGTAGA GCCCGCTGGC
AAGGGCATTG ACACACCGAT GCACGGTGCG CCGCTCAAGC ATGGCAAGAC GGGTATCTTC
TTTGGTATGA AAGCCCCCTT GATGCAGGAT GCGCATGGCC AGATTGAAGA GTCCTACTCG
ATTTCTGCCG GTCTGGACTT CCCGTCCGTT GGACCCCAGC ACGCCTATCT CAATGCCACC
GGCCGCGCCA CCTATGAGTC GGCCACCGAT GACGAAGCGC TGGAGGCATT CCAGCTGCTT
GCCCGCAGCG AAGGCATTAT CCCGGCACTG GAATCGGCTC ACGCGCTGGC GTATGCACTG
CGTCTGGCCA AAGACGCCAC CGAAGAGCAA ATCATTGTGG TCAATCTCTC TGGCCGCGGT
GATAAAGACA TTTTTACCGT ATCTGACATT TTAGACGGCA AGGCCAGCGC ATAA
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| Protein sequence | MSELKLDPYF GEYGGMYVPQ ILMPALKQLE TAFVEAQQDP EFLTEFHDLL KNYAGRPTAL
TLTRNLSPNP KVKIYLKRED LLHGGAHKTN QVLGQALLAK RMGKKEIIAE TGAGQHGVAT
ALACALLGLK CKVYMGAKDV ARQSPNVFRM RLMGAEVIPV TSGSATLKDA CNEAMRDWSG
SYDRAHYLLG TAAGPHPFPT IVREFQRMIG AETKAQMLEK EGRLPDAVIA CVGGGSNAIG
MFADFIDEPS VKLIGVEPAG KGIDTPMHGA PLKHGKTGIF FGMKAPLMQD AHGQIEESYS
ISAGLDFPSV GPQHAYLNAT GRATYESATD DEALEAFQLL ARSEGIIPAL ESAHALAYAL
RLAKDATEEQ IIVVNLSGRG DKDIFTVSDI LDGKASA
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