| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2121 |
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| Symbol | |
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| ID | 4604371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2566971 |
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| End bp | 2567708 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781506 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_927996 |
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| Protein GI | 119775256 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000029074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGAAT ATAAAGTTGC CCCCGATGCT CTGAAAGGCA AAACGATTCT GGTTACCGGT
GCCGGTGACG GTATCGGCCG CGCTGCGGCA CTGGCTTACG CCGCCCACGG CGCCACTGTG
ATCCTGCTGG GCCGCACTGT GAAGAAACTC GAAGCCGTTT ACGATGAAAT TGAAGCGGCA
GGCCAGCCTA CTCCGGCCAT TGTGCCTTTG GATATGAAAG GCGCTACAGA GCAAAACTAC
CGCGACATGG CAGATACCAT CGAAGAGCAA TTTGGCCATC TCGACGGCGT GCTGCACAAT
GCCAGTGTAC TGGGCGTGCT GGGTCCGTTT GAACACATAG ATTTGGCTTC ACTCGAAGAA
GTCATGAAGG TCAACGTTAC CGCTCAGGCG ATCATGACCA AAAGCCTGCT CAAGGTGCTG
CGCAAGGCGC CTGCCGCCTC GGTTATTTTT ACCTCCAGCG GTGTTGGCCG TACTGGCCGG
GCCTACTGGG GCCCTTATGC CTTTTCCAAA TTTGCCACCG AAGGCATGAT GCAGGTGCTC
GCCCACGAAT GTGATGGCAC CAATGTGCGG GCCAATTCAA TTAACCCCGG TGCTACCCGT
ACCAAGATGC GCGCCAACGC TTATCCGGGT GAAGATCCGC AAACCCTGAA AACGGCCGAA
GAGCTGATGC CGCTGTATGT CTATCTGATG GCAGACGACA GCAAAGACCA GAATGGTCAG
GCCTTCAGCG CACAATAA
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| Protein sequence | MLEYKVAPDA LKGKTILVTG AGDGIGRAAA LAYAAHGATV ILLGRTVKKL EAVYDEIEAA
GQPTPAIVPL DMKGATEQNY RDMADTIEEQ FGHLDGVLHN ASVLGVLGPF EHIDLASLEE
VMKVNVTAQA IMTKSLLKVL RKAPAASVIF TSSGVGRTGR AYWGPYAFSK FATEGMMQVL
AHECDGTNVR ANSINPGATR TKMRANAYPG EDPQTLKTAE ELMPLYVYLM ADDSKDQNGQ
AFSAQ
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