| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2037 |
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| Symbol | |
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| ID | 4604287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2474001 |
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| End bp | 2474789 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781414 |
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| Product | anti-ECFsigma factor, ChrR |
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| Protein accession | YP_927912 |
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| Protein GI | 119775172 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.280175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAC ATCACCCCAG CGACGAGATG TTGCTTACCC ATGCTGCCGG CGAAACTGTG
CTTGGTCTGG CGATTGCGCT CAGCGCACAC TGTGAACTTT GCCCCACCTG CGCAGCAAAA
GTGGAGCATT TTCAGCATAA ATTGGCTATG CATCACCTGC CCCTTCCCGA CCAAACAAGC
GAGGCTGCAC CCAGTGGTGT AATCAGTAAA AGTGCGTCTG AGGGGCACAT TGACCAATCA
GGTGTATCCG CTTTGGATAG CGCTTGGGAT ATCTCTTGGG AAAGTCAGGA TAACAGCCTT
GACTCACTCT TTGACGCCAT TACTGCCACT CCGGCAGCAA ATGCTGCGCA GATATCCGCA
ACCGCCGGCA ATGCTGTCTT GCTGGCAACG GAGGTGAAGG GTGTCAGTTA TTCCTTGCCT
AAAGCATTCA GGCCTTTTAT TGCAAACCCT GCGCTGGCTT CCTCCTGGAG TGGTATTGGT
CAGGTAAGCC GTATGCGTTT GGATACCCGG GACGGTAAAG CCAGATCCAG CCTGCTGCAC
ATCGCCGCTG GCGGCGAAAT TCCAGAACAC ACTCATAAGG GGCAGGAAAT CACCCTGCTG
CTTCATGGCC ACTTCAGCGA TGAAATGGGA GACTATGCAC CGGGAGACTT TATGGTGACC
GATACCCGCC ACCAACACAC GCCCAAGACA CTTGATGGCT GTCTGTGTTA CACAGTGGTC
GATGCACCGC TGCACTTCAC CAAGGGATTA TCCAAGCTGC TTAATCCCAT AGGAGAGCTG
ATTTACTGA
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| Protein sequence | MIKHHPSDEM LLTHAAGETV LGLAIALSAH CELCPTCAAK VEHFQHKLAM HHLPLPDQTS
EAAPSGVISK SASEGHIDQS GVSALDSAWD ISWESQDNSL DSLFDAITAT PAANAAQISA
TAGNAVLLAT EVKGVSYSLP KAFRPFIANP ALASSWSGIG QVSRMRLDTR DGKARSSLLH
IAAGGEIPEH THKGQEITLL LHGHFSDEMG DYAPGDFMVT DTRHQHTPKT LDGCLCYTVV
DAPLHFTKGL SKLLNPIGEL IY
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