Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1981 |
Symbol | |
ID | 4604231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2409347 |
End bp | 2410273 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639781358 |
Product | malonyl CoA-acyl carrier protein transacylase |
Protein accession | YP_927856 |
Protein GI | 119775116 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000224477 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000595562 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGATAAAT TTGCCTTTGT ATTTCCAGGG CAGGGCTCGC AGGCCGTTGG CATGCTGACC GATCTCGCTG CCGAATTTCC TGTGGTAACC GAAACATTTG CCGAGGCGAG TGCTGCTCTA GGCTACGATC TGTGGGCTCT GGTGCAGGAT GGCCCCGCCG AGCAGCTCAA TCAAACTCAA AAGACTCAGC CTGCGCTGCT GACCGCCAGC GTCTCCATTT GGCGCGCCTA TCAGGCAAGC GGCAAGCCGC AGCCTGCAGT GCTTGCCGGT CACAGCCTGG GCGAATACTC TGCGCTGGTG TGCGCCGGTG TTATTCCTTT TACCGATGCC GTCAAGCTGG TTGAATTGCG TGGTCAACTG ATGCAGGCCG CTGTGCCGGA AGGCACGGGT GCCATGTACG CCATTATCGG ATTGGATAAC GATGCTATCG CCAAGGCCTG TGAAGAATCA GCCGAAGGCG AAGTAGTGAG CCCGGTTAAC TTCAACAGCC CCGGCCAGGT GGTGATTGCC GGTAATAAAG ACGCCGTTGA GCGCGCCGCT GCCGCATGTA AAGCTGCCGG TGCCAAGATG GCGGTAGCAT TGCCAGTTAG TGTGCCTTCC CACTGCAGCC TGATGAAAGG CGCGGCCGAT AAACTCGCCG AGGCGCTTGC CGCGATCGAA TTCAGTGCAC CTGCCATTCC GGTTATCAAT AACGTGGACG TGCAGGCGCC AACCGACGTA GCGGCTATCC GTGATGCACT GGTGCGCCAG TTGTATTGCC CGGTTCGCTG GACCGAAACC GTGGAAGCCA TGGCCGCCGA TGGTATTACT CATCTGGTGG AGTGTGGCCC GGGCAAGGTG CTGACCGGCT TGGCCAAACG CATCAACAAA TCTGTTTCTG CACAAGCGGT CAATGACGTA GCAAGCTTTG CTGCGCTGAC CGAATAA
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Protein sequence | MDKFAFVFPG QGSQAVGMLT DLAAEFPVVT ETFAEASAAL GYDLWALVQD GPAEQLNQTQ KTQPALLTAS VSIWRAYQAS GKPQPAVLAG HSLGEYSALV CAGVIPFTDA VKLVELRGQL MQAAVPEGTG AMYAIIGLDN DAIAKACEES AEGEVVSPVN FNSPGQVVIA GNKDAVERAA AACKAAGAKM AVALPVSVPS HCSLMKGAAD KLAEALAAIE FSAPAIPVIN NVDVQAPTDV AAIRDALVRQ LYCPVRWTET VEAMAADGIT HLVECGPGKV LTGLAKRINK SVSAQAVNDV ASFAALTE
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