| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1973 |
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| Symbol | sbcB |
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| ID | 4604223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2401157 |
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| End bp | 2402569 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781350 |
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| Product | exonuclease I |
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| Protein accession | YP_927848 |
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| Protein GI | 119775108 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2925] Exonuclease I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.464064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00304849 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAACT ATATTCAGCC CACTATTTTT TGGCACGACT ATGAAACGTT CGGGGCCAGT
CCTGCGAAGG ACAGGCCTGC ACAATTTGCC GGTGTCAGAA CCGATCTGGA CCTGAATATC
ATCGACGAGC CTGTCACATT TTACTGCCGT TTAAGCCCCG ATTATTTACC CGCACCGGAG
GCGATTCTCA TCACAGGTAT TACGCCGCAA CTGGCGAATC GTCAGGGCTT GCCTGAAACC
GAATTCATGG GCCGTATCCA GGCCATTTTC AGCAGACCCA ATACCTGTGT TGCGGGCTAC
AACTCGCTGC GCTTTGATGA TGAAGTAAGT CGCTACGGTT TTTACCGCAA CTTTATTGAC
CCTTATGCCC GTGAGTGGCA ACAGGGCAAT TCCCGCTGGG ATATTATCGA TCTTGTGCGT
GCCTGCTATG CCCTACGCCC GGAAGGCATT AACTGGCCAG AAAAAGAGGA CGGCAGTCCC
AGCTTTAAAC TTGAGCATCT GACAGCAGCC AATGGCCTTG GACACGACAA GGCCCACGAT
GCCATGTCAG ATGTGTATGC CACAATCGCA CTGGCCCGGC TAATCAAGGA AAAGCAGCCC
AAGCTGTTCG ACTATTACTT CCGCTTAAGG CGTAAACAAG CCGTGGCCGA ACAAATCGAT
GTACTGGCGA TGCAGCCGCT GGTGCACATC AGCTCCAAAA TACCGGCAAC CCAGGGCTGT
GCAACCTTGA TAGCTCCGGT AGCGCACCAT ATGCGCAATA AAAATGCCGT CATTTGCGTC
AATCTGGCCA TGGACATTCA GCCACTGATT GACCTCGATG TGGATGCACT GAGAACCCGG
CTTTATACCA AGCGTGAAGA CCTCGCCAAT GATGAGCTGC CCGTGCCTGT GAAGCAAATT
CATCTGAATA AATGCCCCTT TGTCGCCAAC GCCAAAACTC TGGATGACGC CAATGCTGAG
CGATTGGGCA TAGATAAAGC CTTTGCCCGT GAACAATATC GCTTACTCAA ACAGCATCCT
GAGATCCGCG AAAAACTTAC GGCACTGTTT GAGGAAGAAC CCCAGGGTAT GTCCAACGAT
CCCGACTACT CCCTCTACAG TGGTGGTTTT TTCTCTCCTG CCGATCGTGC AAAAATGGAC
ATCATACGGA ATACGTCGCC GGAGCACTTA GCCGCGCTGG AACTGCAGTT TGATGATACC
CGTCTGCCAG AGATGCTCTT TCGCTACCGG GCTCGCAACT ACCCGCTCAC CTTGTCCTAT
GATGAAAGCC TGCGCTGGCG AGAGTTTTGT CAGGCCCGCT TGAACGACCC TGACTATGTC
ATCCGCCTTG AAAACTTGCT GGAAGAAACC ACCAAGGATG AAAAAAAGCA AAAGCTCCTC
GGCGCTTTAT GTCAGTACCT GCAGTCGCTT TAG
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| Protein sequence | MENYIQPTIF WHDYETFGAS PAKDRPAQFA GVRTDLDLNI IDEPVTFYCR LSPDYLPAPE
AILITGITPQ LANRQGLPET EFMGRIQAIF SRPNTCVAGY NSLRFDDEVS RYGFYRNFID
PYAREWQQGN SRWDIIDLVR ACYALRPEGI NWPEKEDGSP SFKLEHLTAA NGLGHDKAHD
AMSDVYATIA LARLIKEKQP KLFDYYFRLR RKQAVAEQID VLAMQPLVHI SSKIPATQGC
ATLIAPVAHH MRNKNAVICV NLAMDIQPLI DLDVDALRTR LYTKREDLAN DELPVPVKQI
HLNKCPFVAN AKTLDDANAE RLGIDKAFAR EQYRLLKQHP EIREKLTALF EEEPQGMSND
PDYSLYSGGF FSPADRAKMD IIRNTSPEHL AALELQFDDT RLPEMLFRYR ARNYPLTLSY
DESLRWREFC QARLNDPDYV IRLENLLEET TKDEKKQKLL GALCQYLQSL
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