| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1948 |
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| Symbol | |
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| ID | 4604198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2375532 |
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| End bp | 2376158 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781325 |
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| Product | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein |
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| Protein accession | YP_927823 |
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| Protein GI | 119775083 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0139] Phosphoribosyl-AMP cyclohydrolase
[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
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| TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGACG AAACCCTTTT AAACCGTCTC GATTGGGACA AACAAGACGG GCTCATCCCC
GCCATCGTGC AAAACCATTT AAGCGGCAAG GTGCTGATGC AGGGCTATAT GGACAAGGCC
GCGCTGGAAA AGACCCTGCA AACCGGCATG GTGACCTTTT TCAGTCGCAG CAAGCAGCGA
CTGTGGACCA AGGGCGAGTC ATCCGGCAAT GTGCTTAGCC TTATCAGCAT CGCCGCCGAT
TGCGACAATG ACAGCCTCTT GGTGCAGGTT CTGCCCAAAG GCCCCACCTG CCATACAGGG
ACCGAGTCTT GCTGGCAAGA TGGCAGCCAC AGCTTTATTG CCGGGCTCGA GAGCTTAATT
CAGGGTAGGA AAAAAGCCTG TGGTGCCGGC GAAGGCGGCA GCAGTTATAC GGCATCCCTG
TTTGCCAGTG GCACCAAGCG CATGGCGCAA AAAGTGGGTG AAGAAGGGCT GGAGACGGCG
CTCGCCGCCG CAACCCACGA TAAAGAAGAG CTGGTAGATG AAGCATCGGA TTTGCTGTTT
CACCTGATGG TACTGCTGGA GGACCAGGGG CTGTCCCTTG CGGATATCAC CGAAAATCTC
TATAAGCGTC ATCAGGCCAG AAGCTAA
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| Protein sequence | MADETLLNRL DWDKQDGLIP AIVQNHLSGK VLMQGYMDKA ALEKTLQTGM VTFFSRSKQR
LWTKGESSGN VLSLISIAAD CDNDSLLVQV LPKGPTCHTG TESCWQDGSH SFIAGLESLI
QGRKKACGAG EGGSSYTASL FASGTKRMAQ KVGEEGLETA LAAATHDKEE LVDEASDLLF
HLMVLLEDQG LSLADITENL YKRHQARS
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