Gene Sama_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1937 
Symbol 
ID4604187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2364640 
End bp2365350 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content52% 
IMG OID639781314 
Producthypothetical protein 
Protein accessionYP_927812 
Protein GI119775072 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACA TCAAAAAAGT GAATCTAACC TCTGAGCGTA CTGCCATAAG CCCTCATCCC 
GGACGTGGTG TATTCCTGCT GGAACTGGCT GTCGCAGCTT TTATCACCCA TATTCCCTAC
CTCGGCATCC CCTTCAAGTG GCTGGAAAGC TTTTTTCATG AGCTGTCACA TGCGTTGGCG
ACCCTTCTGA CAGGTGGAAC AGTAAGCCAT ATCCAGTTGT TTCCTAACGG TGCTGGGCTG
TGTTTCTCAG GCGGGGGAAT GCCTGTGGTC ATAGGGTTCA GCGGTTATGC AGGCGCGGCC
TTTTGGGGAC TGACGCTGTT TGTTATGGCG ACCTGGCCCA GGGGCATAAA GCCAGCGTTT
GCTTTGCTTG GGGTGATGGT GTTGGTGGTC TTGCTGTTTT ACGCCCGTGA TGTGCTGACC
ATGGGCATTT TACTGGTTTT GGCAGGATTA TTTTTTCTGC CTTTGAAGCT TGCAAGTGCG
CCGTGGCTGG TTATGTTTCT AAGGCTGTTG GCTCTCATAG TGCTTTTGAA CGCCCTTAAT
AGTCCAACCT ATCTGTGGGG GCTTGAGGAG CAGGGGGATG CCGTGCTTCT GAGCAACTTT
ATCTGGTTAC CGCCTGCCTT GTGGATTGCA TCCTGGCTGG TGCTTGCTGC GGCATGTCTC
TGGCTTTGTT GGCGTCGGGT TAATGCCCTG GTCAATTGCA ACAAATTATG A
 
Protein sequence
MPDIKKVNLT SERTAISPHP GRGVFLLELA VAAFITHIPY LGIPFKWLES FFHELSHALA 
TLLTGGTVSH IQLFPNGAGL CFSGGGMPVV IGFSGYAGAA FWGLTLFVMA TWPRGIKPAF
ALLGVMVLVV LLFYARDVLT MGILLVLAGL FFLPLKLASA PWLVMFLRLL ALIVLLNALN
SPTYLWGLEE QGDAVLLSNF IWLPPALWIA SWLVLAAACL WLCWRRVNAL VNCNKL