| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1878 |
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| Symbol | |
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| ID | 4604128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2293542 |
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| End bp | 2294381 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639781254 |
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| Product | IS3 family transposase |
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| Protein accession | YP_927753 |
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| Protein GI | 119775013 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00866146 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCAAC TGTGTCAGCT GTTTGATGTT CATCCGAGCG GGTATTACGC GTGGAGAAGT
TGCGCCAAGT CGAAGCGACA ACGCGATAAT GAACGACTTA CAGGCCAACT CAAACAATGT
TGGCTTGAGT CTGGTGGCGT CTATGGATAT CGCAAACTCC ATCGAGATCT ACGTGATCTT
GGTGAGCAAT GCGGTATTAA TCGCGTATAT CGCCTGATGC AGCGAGCAGG ATTGCGAGCA
CAAGTTGGTT ATCGCAAGCC TAGAGCTCGT AGTGGTGAGC CGCATGTTGT AACGCCAAAT
CGTTTAGAAC GGCAATTTAA CCCCTTAGCG CCAAACCAAG CGTGGGTGAC GGATATTACG
TACATCAAAA CGCATGAAGG TTGGCTCTAT CTTGGCGCAG TGATGGACTT GTTCTCACGT
CACATTATTG GTTGGTCAAT GGGCAGTCGA ATCACCAAAG AACTTGCGTT AGATGCCTTA
TTGATGGCGG TTTGGCGTCG TAAACCTGAT GGAAATGTCC TGGTTCACTC AGATCAAGGA
AGCCAATACA CGAGCCATGA TTGGAATGAA TTTCTAAGCG CTCATGGTTT GGAAGGTAGC
ATGAGCCGTC GGGGCAACTG CCATGATAAC GCAGTAGCGG AGAGTTTCTT TCAACTGCTG
AAACGTGAAC GAATTAGGCG AAAAATCTAT GCGACTAGGA ACGAGGCAAA GATGGATGTG
TTTAATTATA TTGAGATGTT TTACAACCCG AAACGACAGC ATAGTTCCAA TGATGGGCTA
TCACCGTTAG AGTATGAGCG TAAGTATTTT AATGAGGCTA AAAGTCGTCT AGTGAAGTAG
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| Protein sequence | MRQLCQLFDV HPSGYYAWRS CAKSKRQRDN ERLTGQLKQC WLESGGVYGY RKLHRDLRDL
GEQCGINRVY RLMQRAGLRA QVGYRKPRAR SGEPHVVTPN RLERQFNPLA PNQAWVTDIT
YIKTHEGWLY LGAVMDLFSR HIIGWSMGSR ITKELALDAL LMAVWRRKPD GNVLVHSDQG
SQYTSHDWNE FLSAHGLEGS MSRRGNCHDN AVAESFFQLL KRERIRRKIY ATRNEAKMDV
FNYIEMFYNP KRQHSSNDGL SPLEYERKYF NEAKSRLVK
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