| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1855 |
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| Symbol | thiH |
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| ID | 4604105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2259305 |
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| End bp | 2260420 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781231 |
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| Product | thiamine biosynthesis protein ThiH |
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| Protein accession | YP_927730 |
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| Protein GI | 119774990 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG GGTATTTCTC TGAGGCATTT GCGCGCCTGA ACCCCGATAG CTTGCGGCTT
AAGCTCTACT CGGCCACAGC ACAGGATGTG GAGGCGGCAC TGCGGGCTCC GGCGGGTAAC
CTGAATGCGC TGCTGGCACT CTTGTCGCCT GCCGCCGAGC CTTATCTTGA GCAGATGGCA
CAAAAAAGCA TGCAGCTCAC CCGTAAGCGC TTTGGTGCCA GTATCGGTAT GTACCTGCCG
CTGTATCTAT CCAATCTGTG TGCAAACGAG TGTGATTACT GCGGCTTTTC AATGAGTAAC
CGCATTAAGC GCAAGACCCT TGATGAAACC GAGCTTACCC GCGAAATGGC CGCCATCAAG
GCCATGGGCT ATGACTCAGT GCTGCTGGTC TCCGGCGAGC ATGAAACCAA GGTCGGCATG
GGCTATTTTC GTAAGGTGTT ACCCGAGGTA AAGCGTGCGT TTTCCTACGT GGCGATGGAA
GTGCAGCCCC TAGCCGAGCC GGAGTACCGC GAGCTGGTAA CCCTCGGGCT TGATGCTGTG
ATGATTTATC AGGAAACCTA TCAGCGAGCC ACCTACGCTG AGCATCACAC CCGCGGCAAA
AAAATGGACT TTATCTGGCG CCTGGATACG CCCGACAGAC TGGCGCTGGC CGGTGTAGAC
AAGATTGGCC TTGGGGTGCT GCTGGGGCTT GATGACTGGC GCCTGGATGC GCTGTTGATG
GGGTATCACC TTGATTATCT TGAGCGAAAG TACTGGCGCA GCCGCTACAG TATTTCACTG
CCAAGACTCA GGCCCTGCAC CGGCGGCGTG GCACCGAAAA CCGAGATAAG CGATAAAGGA
TTGGTGCAAC TTATCTGTGC GTTCCGGTTG TTCAACGAAG CGCTGGATAT CAGCCTCTCG
ACACGGGAGC GGCCGGACTT TCGCGACAAT CTGTTTGCCC TTGGGATCAC CCAAACCAGC
GCTGGCAGTG CTACATCACC GGGAGGATAC TCTGAGCCGG ATACCCATTT GGATCAGTTT
GAAATCAGCG ATGACAGAAG TGCAGCCGAC ATCGCAGCCG TGCTGAAGGC GAGGGGACTT
AACCCCATCT GGAAAGACTG GGAATCCCAG TGGTAA
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| Protein sequence | MSQGYFSEAF ARLNPDSLRL KLYSATAQDV EAALRAPAGN LNALLALLSP AAEPYLEQMA
QKSMQLTRKR FGASIGMYLP LYLSNLCANE CDYCGFSMSN RIKRKTLDET ELTREMAAIK
AMGYDSVLLV SGEHETKVGM GYFRKVLPEV KRAFSYVAME VQPLAEPEYR ELVTLGLDAV
MIYQETYQRA TYAEHHTRGK KMDFIWRLDT PDRLALAGVD KIGLGVLLGL DDWRLDALLM
GYHLDYLERK YWRSRYSISL PRLRPCTGGV APKTEISDKG LVQLICAFRL FNEALDISLS
TRERPDFRDN LFALGITQTS AGSATSPGGY SEPDTHLDQF EISDDRSAAD IAAVLKARGL
NPIWKDWESQ W
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