| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1827 |
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| Symbol | |
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| ID | 4604077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2223552 |
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| End bp | 2224169 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781198 |
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| Product | hypothetical protein |
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| Protein accession | YP_927702 |
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| Protein GI | 119774962 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.545159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.567455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTCCAA CGCCACTCTC AAATCTATTG CCATCAATAG ACAAGCAGCT GGTGATGGTT
GGCGCGCTCT TGTCAGCGCT GTGCGCCGCG CTCTATTTAT TGCCCATTGA TTCACAGCTT
AACTGGCAAC GAAGCCAAAT TGGTGCAGGC GAATATTGGC GCCTTATTAG CGGTAATCTG
CTGCACACCA ATCACTGGCA CCTGCTGATG AACCTGGCAG GGTTCTGGGT GATTTTAAGC
CTGCATCATT TTCATTACCG TGCAACCGGG CTCCTGTTGC TGCTGTTTGC ACTCTGTCTT
GGTGAAGGGG TTGGCCTGTA CCTATGTTAC CCAAGCCTTC ACGCTTATGT TGGCCTGAGC
GGTATCTTGC ACGGCCTCTT TGCCTTCGGC TCCCTGATGG ATATCGAGCG CGGGCTTAGA
TCCGGCTGGC TGCTCCTGCT TGGTCTGGGG TTGAAAGTAG GATACGAGCA GTATTTTGGC
GCCAGCAGCG ATGTGGCAAG CCTGATTGGT GCCAGAGTCG CCACCGAATC GCATCTGGTG
GGCGCACTGG TTGGCACTGT GCTGGGCGCA GCCTATCTGG CGGTGAGGAA ATTGAAACAA
GCTAAGGTTT ATGGGTAA
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| Protein sequence | MSPTPLSNLL PSIDKQLVMV GALLSALCAA LYLLPIDSQL NWQRSQIGAG EYWRLISGNL
LHTNHWHLLM NLAGFWVILS LHHFHYRATG LLLLLFALCL GEGVGLYLCY PSLHAYVGLS
GILHGLFAFG SLMDIERGLR SGWLLLLGLG LKVGYEQYFG ASSDVASLIG ARVATESHLV
GALVGTVLGA AYLAVRKLKQ AKVYG
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