| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1809 |
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| Symbol | |
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| ID | 4604059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2202354 |
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| End bp | 2202998 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781177 |
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| Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
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| Protein accession | YP_927684 |
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| Protein GI | 119774944 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
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| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0158415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.540867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGA ATAACTGGTC TTTACAACCA CAAGATATTT TTAAGCGCAG TCCGATTGTG
CCTGTTATGG TGATCAATAA GTTGGAGCAT GCGGTGCCGC TGGCGAAAGC TCTGGTAGCC
GGTGGTATCA GCGTACTGGA GGTCACGCTG CGCACGTCCT GTGCACTGGA TGCTATCAGT
AAAATCGCCG CTGAAGTACC AGAAGCCCTC GTGGGTGCAG GAACCATACT CAACGAAGAG
CAACTTCGTC AGGCAGTAGA GGCTGGCGCG CAGTTTATCA TCACCCCCGG TGCGTATCCT
GAGCTCCTTA AAACCGCCAT GGAAGGTACG GTTCCACTCA TTCCAGGTGT TGCCAGTATT
TCTGAAGTGA TGGCCGGCAT GGCGCTTGGG TATCGTCACT TTAAGTTTTT CCCGGCTGAA
GCCTCAGGTG GCGTTAATGC CCTCAAAGCC TTCCAGGGGC CACTGGCCGA CATTCGTTTT
TGCCCGACCG GCGGCATCAC ACCGTCAAGC TACCGTGATT ATCTGGCGTT GAAGAACGTG
GATTGCATTG GCGGCAGCTG GATTGCCCCC ACAGATGCAA TGGAAGCAGG CGACTGGGAT
AGGATCACCA GCCTGTGTAA AGAAGCGCTG GCTGGCCTCA ACTAA
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| Protein sequence | MSENNWSLQP QDIFKRSPIV PVMVINKLEH AVPLAKALVA GGISVLEVTL RTSCALDAIS
KIAAEVPEAL VGAGTILNEE QLRQAVEAGA QFIITPGAYP ELLKTAMEGT VPLIPGVASI
SEVMAGMALG YRHFKFFPAE ASGGVNALKA FQGPLADIRF CPTGGITPSS YRDYLALKNV
DCIGGSWIAP TDAMEAGDWD RITSLCKEAL AGLN
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