| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1773 |
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| Symbol | |
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| ID | 4604023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2168820 |
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| End bp | 2169431 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639781139 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_927648 |
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| Protein GI | 119774908 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000455776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00742019 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAAAAGT CGATTGTAGT GCTCTTTTCT GCCGTGCTGC CTTTTGCGGT CTTCGCAGAT
GATGCCAAAG AACTGGTATC CAAATTGGAT GTGATGCAGG GCATTAAGGC CAACTTCAGC
CAGAAAGTAA CAGATCAGAA TGGCAAACTC ATCCAGGAAG GCAGTGGTGT GATTGCCATG
CATCAACCCG ATGCATTTTA CTGGCATCTC ACAGCCCCCG ACGAATCTCT GATAGTGGCC
AAAGACAATA GTGTCTGGGT GTATAACCCC TTTGCCGAAG AAGTCAGTAT CCTGGATATG
GAGGATATTC TTAAGGCTTC ACCCATGGCG CTGTTGGTGC ATCGTGATGA AAAACGCTGG
AATGAATATC AGATTGATAG AAAAGGCAGT TGCTTTGATA TCACGCCACG TCAGGGCGTT
GAAAGTGCCG TCGATACTGT CTCTGTCTGT TTTGCAAATA ATACGCTCTC TGACATTCGC
CTGACGGATG CCCAGGGCAG CACCAGCCAC TTTTCGCTGT CTGAGCAAGC GGCAGTGACC
GATGCCGACG AGAGCCTATT TCAGTTTCAG ATCCCCGATG GCGTCAGCAT TGACGATCAG
CGTCGTCAGT AA
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| Protein sequence | MKKSIVVLFS AVLPFAVFAD DAKELVSKLD VMQGIKANFS QKVTDQNGKL IQEGSGVIAM
HQPDAFYWHL TAPDESLIVA KDNSVWVYNP FAEEVSILDM EDILKASPMA LLVHRDEKRW
NEYQIDRKGS CFDITPRQGV ESAVDTVSVC FANNTLSDIR LTDAQGSTSH FSLSEQAAVT
DADESLFQFQ IPDGVSIDDQ RRQ
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