| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1718 |
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| Symbol | |
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| ID | 4603968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2103739 |
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| End bp | 2104413 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639781081 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_927593 |
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| Protein GI | 119774853 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0955826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0525727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATAAAA TACTCTTGGT CGAAGACGAC AATGGATTTC GGGAGCTGCT AACCGAGGCT
CTCGAGCGGG AAGGTTTGTG TGTATCTGTT GCCACCGATG GCTTTGAAGC CCTTACTTTG
ATGGAAAAGG ATACGCCAGA ACTTATTCTT CTGGATCTGA TGATGCCGGG AATGGACGGA
TTTTCCATGT TAATGCAACG GAGAAACCAG TTACCCGTGA TTGTGATATC CGCACTCGAC
AGCGAAGAAG AGCGAATTCG TGGATATCAG TTGGGCGCCG ATGATTTTTT GACCAAGCCA
TTCAGCATCA AAGAGTTAAT CGTACGCATC CAGGCGCTGG CCCGAAGGCT GAAACGCCAG
GATGTACCGA CACACAAAGA AGCAGACACC CACATTCACT TTGATGAAAC ACGCTACACA
ATCGGTATTG GCGACCGGCA AGTCATGCTT ACCCAAACCG AGTTTAAATT GTTTCGCTAC
TTGTTTGAAC GAAAGGGGCA GGTCGTGACC AAGGCCGAAC TGCAACGTAG TGTGCTGCAG
AAAGAGTTTG GCCGTTTTGA CCGTAACCTT GATATGCATA TCAGTAATAC CCGCCGTAAG
CTTGCACAAA CCAAGTTGCC GCGCAGCATG ATAAATACGG TTCGTGGTCA GGGGTACAGC
TTCGCCTGTT GTTAG
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| Protein sequence | MNKILLVEDD NGFRELLTEA LEREGLCVSV ATDGFEALTL MEKDTPELIL LDLMMPGMDG
FSMLMQRRNQ LPVIVISALD SEEERIRGYQ LGADDFLTKP FSIKELIVRI QALARRLKRQ
DVPTHKEADT HIHFDETRYT IGIGDRQVML TQTEFKLFRY LFERKGQVVT KAELQRSVLQ
KEFGRFDRNL DMHISNTRRK LAQTKLPRSM INTVRGQGYS FACC
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