| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1672 |
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| Symbol | |
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| ID | 4603923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2045010 |
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| End bp | 2045270 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639781035 |
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| Product | hydrogenase assembly chaperone hypC/hupF |
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| Protein accession | YP_927548 |
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| Protein GI | 119774808 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0298] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00074] hydrogenase assembly chaperone HypC/HupF |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.968118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGCCTTT CTGTCCCTTC TGAAGTGGTG GCACTGCATG ACGATGAGCA GGCCATTACC
GTCGATACCC TGGGGGTACG GCGAAAAGTC AGTCGTCATT TACTCAGCGA TGAAATCCAA
ATCGGTGACT ATGTGTTGAT CCACATCGGC TTTGCGATGA ATAAAATTGA CAAAGAAGAT
GCTCTGGAGA GTCTTAAGCT TTATAAGGAA ATTGTAGAAA AGCTGGAGGC AGAAAACCAT
GCCCAATCAA GCCATCAATG A
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| Protein sequence | MCLSVPSEVV ALHDDEQAIT VDTLGVRRKV SRHLLSDEIQ IGDYVLIHIG FAMNKIDKED
ALESLKLYKE IVEKLEAENH AQSSHQ
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