| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1659 |
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| Symbol | |
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| ID | 4603910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2026284 |
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| End bp | 2028164 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781022 |
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| Product | glycosidase |
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| Protein accession | YP_927535 |
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| Protein GI | 119774795 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.763441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTG TTTCTTCTCG CCGCATTTCC CTGCTGGCCC TGACCAGCCT GACAGCCCTG
CTCGGCTGCA ACGTGCCACA CAATAGCAAC ACGGATATGT CAACAACCCA GATAACATCC
GCTGACGCGG TAACGATGAA ACAGCAGGCG TCCACACCCT CGCCTCTGGT GTATCAGCTC
TTGCCCCGGG TCTTTGGCAA TCAAAACCTC ACCAACACCC CCTGGGGCAG CATAGAGGAA
AATGGCAGCG GTAAATTTGC CGATATCGAT GAGGTGGTGC TGGCTGACCT TAAACACCTG
GGGGTAAGTC ATGTGTGGTA CACGGGTGTC TTGCATCATG CCTCCGTGAC TGACTACAGT
ACCTATGGCA TTCCCCGGGA TGATGCCGAT GTGGTCAAGG GGCTGGCGGG CTCCCCCTAC
GCCATCCGAG ATTATTACAA TGTGAATCCC GACCTGGCAC TCAACCCCGA AAAACGACTG
GAGGAATTTA AACAGCTGAT AGCACGCACC CACAAGGCGG GGCTTAAGGT CATAATCGAC
ATAGTGCCCA ACCATGTGGC GCGTCATTAC CAATCCCTGT CGGCGCCTGC GGGCATTCAA
AATCTGGGTG CCGGGGACGA CACCCAAAAG GCCTACGCCA AAAGCAATCA CTTCTACTAT
GTGCCGGGGG CCGACTTTAA GGTGCCCGAC GAGACAAACC GACCTCCTTC GGCAAGTCTT
GATAAGGTGA ATGCCGCACA GGATGGCCAT TTTCAGGAGT CTCCCGCCAA ATGGACCGGC
AATGGTGCCA CCAGCCCCAA ACCCGATGCG TCTGACTGGT ATGAAACGGT TAAGCTCAAT
TACGGGGTGA CACCGGATGG CAAACATGAG TTCCCTGAGG TGCCTGCGGC GCTGGCCTTT
GCCCCTATAG AGCATCATCA GGCCTTTTGG TCCACGCAGC ACAACCTGCC CGATACCTGG
TACAAAATTC GGGAAATCAG CCGATTTTGG TTGAGCCTGG GCGTCGATGG ATTCCGCTTT
GATATGGCGG AAATGGTGCC TTTGTCCTTC TGGAGTTTTC TTGCCAGCGA TATCAAGGTC
GTTAATCCTG ACGCGCTGCT CATTGCCGAG GTGTACGAGC CCGGCCGTTA CCGGGACTTT
ATCGGCCTGG GAAAACTGGA CTTGCTCTAC GACAAAGTTG GCCTGTACGA CAGTCTCAAG
GCCGTCAGCC AGCAAGGCAT AGCCAATCCA GATGCCGTGG ATACGGCCCA AATCGGTGAG
CGATTAACCG AAATCCGCGA TATCGCGCCC CATATGCTGC ACTTTTTGGA AAACCACGAC
GAACAGCGTA TCGCCAGCCC GGAGTTTTTG GGCAGGGCTG AGCGGGCCTT GCCGTCACTG
GCGGTCTCCC TGTATGCCAC CGAAGGGCCT TTTCTGCTCT ATTTCGGCCA AAGCCTGGGT
GAGGACGGCA GCGAAACCGG CGGTTTTGGC AAACCCAGCC GCACCAGCAT ATTCGATTAC
GTCAGTGCAC CGGCCATGGC CCGTTATCTG AAAAGGCCAG ACACGAAAGA GGGCAGCGAG
GAAGCTGCCG GAGCGGCGCA GCAGGATGCA CAACTGGGTG TTGCCAGTTT GCCCAACGAG
CGCGAACTCA GGCAGGCCTA CAGTGCCATG CTGGCTCTGG CCGGCACCAT CAAGTCGGCC
GGTGAGCTTA AGATTTTGCC ATCCACAGGG CCCGTATTCA CGTTTCGCCG GGGGCAGTAT
CTGGTCACGG CAAACTTCGC CGATATAGCG GTAGCCCTTG AGGCAGTGAA CGGGAAAGCG
CTGGAGCCAA TCCTCAGTAT TCCGGCAAAT CAGCACACCG AGCTTGCCCC CTGGGGAGTG
CGCGTCAGTC TGGTGGAATA A
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| Protein sequence | MAFVSSRRIS LLALTSLTAL LGCNVPHNSN TDMSTTQITS ADAVTMKQQA STPSPLVYQL
LPRVFGNQNL TNTPWGSIEE NGSGKFADID EVVLADLKHL GVSHVWYTGV LHHASVTDYS
TYGIPRDDAD VVKGLAGSPY AIRDYYNVNP DLALNPEKRL EEFKQLIART HKAGLKVIID
IVPNHVARHY QSLSAPAGIQ NLGAGDDTQK AYAKSNHFYY VPGADFKVPD ETNRPPSASL
DKVNAAQDGH FQESPAKWTG NGATSPKPDA SDWYETVKLN YGVTPDGKHE FPEVPAALAF
APIEHHQAFW STQHNLPDTW YKIREISRFW LSLGVDGFRF DMAEMVPLSF WSFLASDIKV
VNPDALLIAE VYEPGRYRDF IGLGKLDLLY DKVGLYDSLK AVSQQGIANP DAVDTAQIGE
RLTEIRDIAP HMLHFLENHD EQRIASPEFL GRAERALPSL AVSLYATEGP FLLYFGQSLG
EDGSETGGFG KPSRTSIFDY VSAPAMARYL KRPDTKEGSE EAAGAAQQDA QLGVASLPNE
RELRQAYSAM LALAGTIKSA GELKILPSTG PVFTFRRGQY LVTANFADIA VALEAVNGKA
LEPILSIPAN QHTELAPWGV RVSLVE
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