| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1651 |
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| Symbol | |
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| ID | 4603902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2016223 |
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| End bp | 2016480 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781014 |
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| Product | phosphocarrier protein HPr |
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| Protein accession | YP_927527 |
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| Protein GI | 119774787 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACGAAA AAACTGTCAC CATCACTGCA CCCCATGGGA TCCATACCCG CCCTGCCGCC
CTCTTGGTCA AAGAGGCCAA ATCCTTTGAA TGTGACGTGA TAGTCGAATG TAATGGCAAG
CAAGCCAGCG CCAAGAGCCT GTTTAAGTTG CAGACCCTTG GGCTTTATCA AGGGGTAAAC
GTCCGGGTAT TTGCCCAGGG CCCCCAAGCC GAAGACGCCG TTGAAAGAGT CTCGGCGCTC
CTGGTTACTT TAAGCTGA
|
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| Protein sequence | MYEKTVTITA PHGIHTRPAA LLVKEAKSFE CDVIVECNGK QASAKSLFKL QTLGLYQGVN
VRVFAQGPQA EDAVERVSAL LVTLS
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