| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1627 |
|---|
| Symbol | |
|---|
| ID | 4603879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 1991829 |
|---|
| End bp | 1992875 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639780991 |
|---|
| Product | arginine N-succinyltransferase |
|---|
| Protein accession | YP_927504 |
|---|
| Protein GI | 229220633 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3138] Arginine/ornithine N-succinyltransferase beta subunit |
|---|
| TIGRFAM ID | [TIGR03243] arginine and ornithine succinyltransferase subunits
[TIGR03244] arginine N-succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.299273 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTTA TCCGTCCTAT ACAGGGTTCG GATTTCCAGG CGCTGATGAC CATGGCGCGG
GAATCCGGAG CAGGTTTTAC CTCCCTGCCC CTTTGCGAGC GAAAACTGAC CCACAAAATA
GCGCACTCGG AAGAGAGCTT TGCCGCCGAT ATCGATGCGC CTGGCGATCA GGGTTATCTG
TTTGTGCTGG AAGACACAGA CACGGGCGAA ATCCTTGGCG CTTCTGGTAT CGAGGCCTCG
GTTGGCCTGG GCAGCCCGCT GTACCACTTC CACAAGAGTA CCGTGGTGCA TCAGTGTAAG
GAGCTGGATA TTTTCAATCC GGTGGAAGTC CTTACCCTGG GCAATGATTA CACAGGCGTG
ACTGAAATCT GCACCCTGTT TTTGCGTGAG CCTTACCGGG TGGGCCTCAA TGGCCGCTTC
CTGTCCAAGG TACGCTTTAT GTTTATGGCC GAGCACCCCA AACGTTTTTC CCAGCTGGTA
ATTGCCGAGA TGCGCGGCGC CGCCGATGAA AACGGTCAGC CCCCATTTTG GGGCTGGCTT
AGGGAAACCT TCTTCAATAT GGAGTTTTCC AAGGCCGATT ACCTGATTGG CGTGGGCAAC
AAGGGGTTTA TTGCCGACCT GATGCCCCGC TATCCCATCT ACGTTGATTT GTTGCCCGAA
GCGGCCCGAA ACACCATAGG CCAGGTGCAT GAAAACACAG TTCCTGCCCT TAAGCTTTTG
GAAAACGAAG GTTTTATGCA TCGTGGCTAT GTGGATCTGT TCGATGCTGG CCCCACGGTG
GAAGCCCAGC TTAAGCAAAT CAAGTCGGTG CGCCAGAGCC ACAGGGTCAA GGTGGTGATA
AGCCAAAACC CGGCCGAGCA CAAAGGTGAG TTTCATCTGG CAGTGTGCAA CTGCGACAGC
AAGGCATTTC GCGCCACCGT CAGCGACGAG TGTCGTCTCG AACCCGAAAC CCACAGCATA
CTGATGAGCC CGGCCATGGC CGATGTGCTC AATGTCGCCG AGGGCGATTT GGTGCGTTAC
TTAAATCTGG ACAAGGGGGC CAAATGA
|
|---|
| Protein sequence | MLLIRPIQGS DFQALMTMAR ESGAGFTSLP LCERKLTHKI AHSEESFAAD IDAPGDQGYL
FVLEDTDTGE ILGASGIEAS VGLGSPLYHF HKSTVVHQCK ELDIFNPVEV LTLGNDYTGV
TEICTLFLRE PYRVGLNGRF LSKVRFMFMA EHPKRFSQLV IAEMRGAADE NGQPPFWGWL
RETFFNMEFS KADYLIGVGN KGFIADLMPR YPIYVDLLPE AARNTIGQVH ENTVPALKLL
ENEGFMHRGY VDLFDAGPTV EAQLKQIKSV RQSHRVKVVI SQNPAEHKGE FHLAVCNCDS
KAFRATVSDE CRLEPETHSI LMSPAMADVL NVAEGDLVRY LNLDKGAK
|
|---|
| |