| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1603 |
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| Symbol | |
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| ID | 4603855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1959005 |
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| End bp | 1960882 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780962 |
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| Product | hypothetical protein |
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| Protein accession | YP_927480 |
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| Protein GI | 119774740 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00349835 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTAC AGTTGGAAAA GGCATTGTCC CTGGTGGCTG TTGGTGTGCT CGGGGTACTT
GGAAGTGCTC AGGCCGCGCC GGTTTACGAA ATTAAAAACC TCGAGAACTA CGATCTTCGA
GGCACCCTGG AAGGAACCCG CAACGGTTAC GCCATGGGCG TTAACGAAAA TGATGAATTA
GTGGGGATCT CCAAGGGCCG CAAGAAGCTG TCCACTGACG ACGTCGAAGG CGGCATCATC
GACAGTGACG ATGGGATTGC CGATGAAGAG CAGATCACCT ATTCAGTGCT GCTGCCCATT
GTGGCCAACA ACTTTACCTT CAGTGCGGCG GCAAATGGTG CCACCGGTGC CTGGGTGCCT
ACCTTTGAAA GCATCAATGG CACCACAGAC CCCAAAGATA CGGACACCAG TGTTCCTGAA
ACCATCAACT CCATTGATAC CTTCTACTAT GGTATTTCAG ATGACGGTGT GAAAGTGGGG
GCCACCACTG CACCTCAGAA GACCCTCGAA TATACCGGCA GCATCGAAGA TCAGGAGTTT
TGGTACTTCC GTGACTTCGA GCTGCGTGGC GTTGCCAAAA CGACCAGTGG TGATGTCGCT
CTGCCACCGC CTTATGTGGA ATACACCAGC ACCAAAGAAG GCGAATCGGA CAAAAAGGTT
TACGTGGGTG GAACGTCCGC GGCCACTGCG ATATCGGGAA ATTTAGTTAC CGGTTATGCC
AGTACCGATA TCAGTCGCTA TGGCGGTGAG CGCGTACAGG CCTGTCTTGA CAATGCCAGC
ACAGAAGGCG CATTGCCGGT TGATGTATGT GTTCAGATTG AGCAATACCC CAACTCCACC
GGTACCCGTA ACGTTCAGTA TCAGACCCGC GCCTATGTGT GGCAGCTGGA TAATGACACT
GTGACAGGTA CGGCCTTGCC ATTGGGGCTT ACTCCCGCTG CTGACTCAAC CTTTACTTAC
ACAGCGCAGG GCCTTGGCAT CAACGCCGAG GGAACTGTGG TGGGGCGCTC CCATGTGAAC
CGTAACGGCG ATGAAGATTA TTTCCGCATG GACGCCGCCT ACTGGACTCG TAAACAGGAT
GGCAGTTATG ACTATCACTG GGTACCAGTA ATCAACGTAG ATGACGTGCA CAGTTCACTG
GCCTACGATA TCAACGATAA CGGTATTTTG GTGGGCTCTT ATCGCAGTTA CATTCAGGGT
TATCTGCGTG ACAAGTTCTT CTACCTGGAT ACCAAGGCGA CCGATGCCAA GCCGGTTGTG
CCGAACGATT TTTACAGCAC ATTGTCGGAT CTCTCCAGCC GCGCCAAGAG CATTAACAAC
AAGGGCCAGG TGGTTGGTTA CATAGAAACC ACCCACGAGA AAGAAAAGCC ACGTCCCAAG
GCCGGTTTCC TGTTTGATAT GAATGCCAAA GAGGGTGGGG AGTTCTCCAA CCTCAACAAC
CTGCTGACCT GTGAGTCCAA AGGCTTCGAA CAGGGCTCGG ATGGCAACTG GCAACGTCAT
CAGGTTGAAG TGGTGGATGG CAGCGGCAAA ACCTTAACCT ACAGCGCCGA TATACAGGTT
GTTGAAGCCA ACAGCATCAA TGAAGCCGGT GTGATTGTCG GCACTGCTTT TGTGCGCAAG
CCGGTTTATA AGGTCGACGA AAACGGTCTG CCCGTTGTCG AAAATGGCAA GTTTGTATTT
GAACTCGACG GTAACGGTAA TCCTGTGACG TCTTACTTGC CGCGTGCCGT GGTGCTTGAG
CCTGCAGGGA CTGGTGCCAT AGCTTGTACT GAGGTAGACG AAAACACGGG TGGCGAGAAA
TATGAGCGCC AGGGCGCCGC CAGTTTGTTC GCTTTGCTGT TATTGCCTCT GGTTTGGCTC
CGTCGCCGGG TACGCTAA
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| Protein sequence | MKLQLEKALS LVAVGVLGVL GSAQAAPVYE IKNLENYDLR GTLEGTRNGY AMGVNENDEL
VGISKGRKKL STDDVEGGII DSDDGIADEE QITYSVLLPI VANNFTFSAA ANGATGAWVP
TFESINGTTD PKDTDTSVPE TINSIDTFYY GISDDGVKVG ATTAPQKTLE YTGSIEDQEF
WYFRDFELRG VAKTTSGDVA LPPPYVEYTS TKEGESDKKV YVGGTSAATA ISGNLVTGYA
STDISRYGGE RVQACLDNAS TEGALPVDVC VQIEQYPNST GTRNVQYQTR AYVWQLDNDT
VTGTALPLGL TPAADSTFTY TAQGLGINAE GTVVGRSHVN RNGDEDYFRM DAAYWTRKQD
GSYDYHWVPV INVDDVHSSL AYDINDNGIL VGSYRSYIQG YLRDKFFYLD TKATDAKPVV
PNDFYSTLSD LSSRAKSINN KGQVVGYIET THEKEKPRPK AGFLFDMNAK EGGEFSNLNN
LLTCESKGFE QGSDGNWQRH QVEVVDGSGK TLTYSADIQV VEANSINEAG VIVGTAFVRK
PVYKVDENGL PVVENGKFVF ELDGNGNPVT SYLPRAVVLE PAGTGAIACT EVDENTGGEK
YERQGAASLF ALLLLPLVWL RRRVR
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