| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1590 |
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| Symbol | |
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| ID | 4603842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1937050 |
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| End bp | 1938060 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780946 |
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| Product | BNR repeat-containing protein |
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| Protein accession | YP_927467 |
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| Protein GI | 119774727 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCTGC GAGTCTTGTT GCCACTCTCT TTACTCTCCC TTGCCGCGAT GTCTGCCCAG
GCGGCAGATA GTCCGGGGCA CCAGCTTCAA CCCAATGCGA TCAAGAGTCT GTTACTGGAC
GTTGTGAATG CGGGTGAATA TTTGGTTGCT GTGGGTGAGC GAGGCCATGT TCTGCTGGGT
AACGGCAGTT GGCAACAGGT TGAAACACCG ACGGATGCGC AGCTCACCAA GGTTTTTTTC
CTCAACAATC AGTTGGGATG GGCAGTAGGG CACGACGCCA CTATTATTCA TACCCAGGAT
GGCGGAAAGA CCTGGAACAA ACAATTCTCC GCCCCCGAGC GTGAACGCCC CTTTATGGAT
GTGTTGTTCG TGGATGACAA GCGCGGCTTC GCGGTAGGCG CCTATGGTCT TTTCTTTACT
ACCTTTGATG GTGGTAAACA GTGGCAGGAG GTTTTTCATC AGGAGCTACT GTTTGAAGAA
GATCTGGCTT ATTTGAACGA GCTTAAAGAC ACAGATCCCG AGGCCTATGC CATTGAACGG
GCTTCTCTGC TGCCTCATTT TAACCGTTTG CTGCGTCTCA ACGATGGTCG CTTGCTGATG
GTGGGAGAGC TGGGGTTGGT GGCTGTATCA GACAACAACG GTGACAGCTT TACCCGCTTG
CCATTTGATT ATGAAGGCTC GATGTTCTCT GCCATTCAGC AGGGTGACAG TGTGTATGTG
ATGGGCCTCA GAGGCCATGT GTTTGAGGCC GGATTAGCCC TGGATGACTG GCAGCAACTC
GATTTACCCG TCGAGTCCAG TATCAATGGC GCCCTTGCAG ATGATAAAGG CACTATTTAC
TTTGTGGGTA ACGCCGGTGT CATACTCAGT AAACCGGATG GTGAAGAGGT GTCTCTAGTG
GCGCGCCGCC AGGGAGAAAA CCTCGTTGCA GCGGCCAAAG ACAGCCGCGG TAAAGTGTGG
CTTGTGGGGG CCAAGGGCGT ATTTGCGCTC GAGGATGCCC AGAAACATTA A
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| Protein sequence | MLLRVLLPLS LLSLAAMSAQ AADSPGHQLQ PNAIKSLLLD VVNAGEYLVA VGERGHVLLG
NGSWQQVETP TDAQLTKVFF LNNQLGWAVG HDATIIHTQD GGKTWNKQFS APERERPFMD
VLFVDDKRGF AVGAYGLFFT TFDGGKQWQE VFHQELLFEE DLAYLNELKD TDPEAYAIER
ASLLPHFNRL LRLNDGRLLM VGELGLVAVS DNNGDSFTRL PFDYEGSMFS AIQQGDSVYV
MGLRGHVFEA GLALDDWQQL DLPVESSING ALADDKGTIY FVGNAGVILS KPDGEEVSLV
ARRQGENLVA AAKDSRGKVW LVGAKGVFAL EDAQKH
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