| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1586 |
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| Symbol | pepN |
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| ID | 4603838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1930307 |
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| End bp | 1932865 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780942 |
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| Product | aminopeptidase N |
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| Protein accession | YP_927463 |
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| Protein GI | 119774723 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.109191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAT TACAGGCCAA GCATTTAAAA GATTATCAGT CTCCCGCTTT CACTATTTCC
GAACTGGATA TGTTGGTGGA TTTGTACCCA TCCAAGACAC GCGTCATTGC CCGCAGCCAG
GTGATCCGCT GCCGGGATAA TGAAGCCCTG TTGCTTGATG GTGAAGGCCT TGAACTCAAA
TCAGTCAAGG TAAACAACGA AGCGTACCCA TATCAGATTG TCGCGGGTCA GTTACGTCTG
GAAGGGCTTC CTGCACACTT CGCACTTGAG ATTGAAACCG AGATAGACCC GGTGGGCAAT
TCCAGCCTTG AGGGGCTGTA CATGTCAGAT GGCGCCTACT GTACCCAGTG CGAGGCCGAA
GGCTTTCGTC GTATTACCTA TTTCCCCGAT AGGCCCGATG TGCTTGCCAA ATACCGGGTG
CGAATTGAAG CGCCCAAGAC GGGTTTCCCA TACCTTTTGA GTAACGGTAA CAAGGTCGAA
GCCGGTGCAC TCGATGACGA CCGCCATTAT GTGGTGTGGG AAGACCCATT CCCGAAGCCA
AGCTATTTGT TTGCCCTGGT TGCCGGTGAT TTTGACTTGC TTCAAGACAG CTTTGTCACC
CAGAGTGGCC GTCATGTGGC ACTCGAAGTC TTCGTCGATA AAGGCAATTT ACATAAGGCC
CATCATGCGA TGGCAAGCCT TAAAAAATCC ATGGCGTGGG ATGAAAGCCG CTTTGGTCTA
GAGTACGATC TCGATATCTA CATGATTGTA GCCGTTGACT TTTTCAACAT GGGCGCCATG
GAAAACAAGG GGCTCAACAT TTTTAATACC AAGTATGTTC TTGCCGACAT CGAAAGTGCA
ACGGACGATG ACTTCCACGG TATTGAATCT GTGGTAGGGC ATGAATACTT TCACAACTGG
ACCGGCAATC GTGTTACCTG TCGCGATTGG TTTCAGTTGA GCCTCAAAGA AGGTCTGACG
GTGTTTCGCG ATCAGGAGTT CAGCTCGGAT GTTGGTTCCC GGGCGGTAAA TCGTATTCAG
GCGATTAAGG TCATTAAAAA TCAGCAGTTT GCCGAAGACT CGGGCCCTAT GGCCCATCCC
ATCCGCCCTC AAAGCGTGAT TGAGATGAAT AACTTTTATA CGGTCACTGT GTACAACAAG
GGTGCTGAAG TTATTCGAAT GATGCATACC CTGCTGGGCG AAGCGGGTTT CCAGGCAGGT
ATGAAGCTGT ATTTTCAGCG CCACGATGGT CAAGCCGTCA CCTGTGATGA TTTTGTCGGA
GCCATGGAAG ATGCCAGCGG CGTCGATTTG AGCCAGTTCC GTCTGTGGTA TAACCAGGCT
GGTACCCCAA CGCTAAAAGT TTCAGACAGC TTTGATGCCA GAAGTGGAGA ATACCGCCTG
GTGGTTCTGC AGCAGTTGCC GCCTCAGGCG GGTGACGATG CGAAGCCCAT GCACATTCCC
TTTGATCTGG AACTTATCGG TGATGATGGC AAGTCGCTTT TAAACAAGGT GCTTGACGTT
AAAGAAGCCC ATAACGAATT TGTGTTTGAG GGACTCAGCA CCAGGCCTGT ACCGTCTCTG
CTGCAAAACT TTTCGGCGCC GGTGAAGCTT GAGTACGACT TCACCACAGC GCAGCTTATC
AGTTTGATGC GTAATGCAAG CTCGGAAGTC GCCCGCTGGG AAGCTTCGGT CAGCCTTATC
AGCCGAGCCA TTTGGGGCAA TGTGAATGCC CTTGTTTCCG GCGGTGATAT GGCGCTGGAT
ACCCGTGTGG CCGATGCCTT CCGTGCTGTG CTGCTGGATG AGGAACTCGA CCCCCAACTT
GCCGCCGAAA TTCTCAATAT TCCATCTATC AATGCCTTGA TTGAGCAGGT AGACAGCGTC
AACTTCGATG CACTGGTCTC TGCCCGGGCC TTTGTGCTGG AAGAGCTGTC GGCCAATCTG
GAAGACGAGC TGTTGGTTCG TTACAGAGAG CTTTATCACA TCGACTCAGC GCCAGCGCGG
GCCCTTAAGA ATGCTTGCCT TGCCATGCTC GCCCGTGGTG GTTTGTGCCC CGAAGAGTTG
GTCGAAAAGC AGTTTAATGA AAGCTGCAAT ATGACAGACT CGCTTGCAGC CCTTGGTGCT
GCCATGGCTG GCGAGCTTGA TTGCCAGGAT AGCTTGCTTG AGCGGTTTGA GCAGCGCTGG
GTCGACACGC CTCTGGTGAT GGATAAGTGG TTTATGCTAC AAGCCAGTCG TCAGGATGAC
GCTGTTCTTG GCCGTATCGA TGCTCTGGTC AGCCATAAGG CATTCAGTCT CAATAACCCC
AATCGTGTGC GCTCGTTGAT TGGCTGCTTT GCGGCCAATA ATCCAGTGCA ATTCCACCGC
GAAGATGGCG AGGGATATCG CTTGTTAACC CGTTATTTGA AGCAGCTCAA CGGCGTAAAC
CCACAGGTCG CCGCGCGGAT CATTACGCCA CTCATTCAGT TCGGCAAATT TGATGAAGGC
CGTAAGCAGA ACATGAAAGC CTGCCTCGAG GAGCTGATTG GTATGCCTGA GTTATCACGT
GATCTGTACG AAAAGGTATC GCGTGCATTG TCGCAGTAA
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| Protein sequence | MSELQAKHLK DYQSPAFTIS ELDMLVDLYP SKTRVIARSQ VIRCRDNEAL LLDGEGLELK
SVKVNNEAYP YQIVAGQLRL EGLPAHFALE IETEIDPVGN SSLEGLYMSD GAYCTQCEAE
GFRRITYFPD RPDVLAKYRV RIEAPKTGFP YLLSNGNKVE AGALDDDRHY VVWEDPFPKP
SYLFALVAGD FDLLQDSFVT QSGRHVALEV FVDKGNLHKA HHAMASLKKS MAWDESRFGL
EYDLDIYMIV AVDFFNMGAM ENKGLNIFNT KYVLADIESA TDDDFHGIES VVGHEYFHNW
TGNRVTCRDW FQLSLKEGLT VFRDQEFSSD VGSRAVNRIQ AIKVIKNQQF AEDSGPMAHP
IRPQSVIEMN NFYTVTVYNK GAEVIRMMHT LLGEAGFQAG MKLYFQRHDG QAVTCDDFVG
AMEDASGVDL SQFRLWYNQA GTPTLKVSDS FDARSGEYRL VVLQQLPPQA GDDAKPMHIP
FDLELIGDDG KSLLNKVLDV KEAHNEFVFE GLSTRPVPSL LQNFSAPVKL EYDFTTAQLI
SLMRNASSEV ARWEASVSLI SRAIWGNVNA LVSGGDMALD TRVADAFRAV LLDEELDPQL
AAEILNIPSI NALIEQVDSV NFDALVSARA FVLEELSANL EDELLVRYRE LYHIDSAPAR
ALKNACLAML ARGGLCPEEL VEKQFNESCN MTDSLAALGA AMAGELDCQD SLLERFEQRW
VDTPLVMDKW FMLQASRQDD AVLGRIDALV SHKAFSLNNP NRVRSLIGCF AANNPVQFHR
EDGEGYRLLT RYLKQLNGVN PQVAARIITP LIQFGKFDEG RKQNMKACLE ELIGMPELSR
DLYEKVSRAL SQ
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