| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1570 |
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| Symbol | |
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| ID | 4603822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1914689 |
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| End bp | 1915603 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780926 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_927447 |
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| Protein GI | 119774707 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0308383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG ATGTGGATGC CTTTAAGGTA TTGGAAGTGC TGGTAGAAGA GGGCAGCTTT
GCCAAGGCGG CGGAGCGGCT GCACAAGGCC CAGTCGGCGG TGAGTTACCA GATTAAAAAG
CTTGAGCAGC ATCTCGGCGT TAGCCTGTTA TCCCGGGAGC AATACCGCGC AGAGCTCACC
GCCGAAGGGC GGGTAATCCT CGCGGAAGGC CAGCGGCTGT TGTCGCACCT CGCCAATATC
GAGCACCTGG CGAGCCGTTT CAGTGAGGGG TGGGAGCCCA AGCTGGAGCT GGTAATTGAT
GGCGCCTTGC CCATGGAGCC GATCATGACG GCGCTTAAAC GTATGGCCGA GCATCAAATT
CCCACCAAAA TTCAGCTCAA TATGGAGTTC CTTGGCGGGG TGCAGCACAG ATTCGAGCGC
GACAATGCCG ATTTGATGCT GGTAAAAGAC TATCGCACCG GCCCCTATTA TTATGCCAAG
CCATTGCCCG CCATCACCAG CGTGTTGCTG GCGGCCCCTC ATCATCCGCT GGCGGGGCGT
AAAGCCCTTA CCCTCACCGA GCTGCAGCAA CACGTAGAGC TGACCATTGA AGACTCATCG
CCGGTCAAAA CCTACCGTGA TGAGCTGCAG TTTGGCGGTG ACAAGGTATT TTATCTCTCT
GGTTTTATTA TGAAAAAGAA CGCGCTGTTA AAAGGATTGG GTTTTGGTTG GATGCCCGAC
TTTTTGGTGC GCGATGAGCT TAAAGCGGGT CTGCTTACTG AAATCGACTT TGTGGGCGGT
AGCCGTTACA CCTTCGTGCC GCAGTTGGTC TCTACGCTGG AACGCCCCCT GGGCCGCGCC
GGCAGGCTAT TTACAGAACT GATATTGGAA GAATTTGCCA AAGAACCCAT GGGGATACCA
GAGGGGCTGG GTTAA
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| Protein sequence | MRIDVDAFKV LEVLVEEGSF AKAAERLHKA QSAVSYQIKK LEQHLGVSLL SREQYRAELT
AEGRVILAEG QRLLSHLANI EHLASRFSEG WEPKLELVID GALPMEPIMT ALKRMAEHQI
PTKIQLNMEF LGGVQHRFER DNADLMLVKD YRTGPYYYAK PLPAITSVLL AAPHHPLAGR
KALTLTELQQ HVELTIEDSS PVKTYRDELQ FGGDKVFYLS GFIMKKNALL KGLGFGWMPD
FLVRDELKAG LLTEIDFVGG SRYTFVPQLV STLERPLGRA GRLFTELILE EFAKEPMGIP
EGLG
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