| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1550 |
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| Symbol | |
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| ID | 4603802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1887305 |
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| End bp | 1887988 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780905 |
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| Product | threonine efflux protein, putative |
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| Protein accession | YP_927427 |
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| Protein GI | 119774687 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.306225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGACT TTACCCTGCT TGGCAGCATT GCCGTCATTC ATACCATCGC ACTGGCAAGC
CCGGGGCCGG ACTTTGCCAT TATGCTCAAG GTATCTCGCT ATCAAACCCG CACGGTTGCC
ATCATGACCG CATTGGGCAT TGCTGCGGCC ATTTTGGCCC ATACCCTTGC CAGCCTCACC
GGCCTCAGCT TGCTTATCCA CACTACCCCC TGGCTGTTTG GGACTGTGCA GGCGCTGGGC
GCCAGTTACC TGGGATATAT GGGGATGGGC GCGTTGATGT CGGTGCGAAA GCAATTTTTA
TTGCGAAGGG AGCTGCCATT TTCGGCGGAA TCAACGCCAA CGGATGTGCC ACATAACCCA
GACCCGGTGC TGAGCACAGC AAAGGGCTTT CGCCTGGGAC TTTACACCAA TTTATTGAAT
CCAAAGGCGT TGGTATTTTT CCTGACCTTG TTTTCTGCCA TGGTGGGCCC CGACGTAAAC
GGCCCTACCC GCATCGCGTT GTTGGTGCTG ATGTTTACCC TGTCCTTCGC CTGGTTTGGT
CTGCTCGCCG TGCTGCTCAC CAAAGGCAGC AGTCAACGCA CGCTGGTGCG AATGGGGCCG
ATTATTGACC TGGTAACAGG AGTGCTCTTT TTGATGGTGA GCGTGGCCAT TCTCTACGGA
CTGGCCACCG AATATTGGGG GTAA
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| Protein sequence | MLDFTLLGSI AVIHTIALAS PGPDFAIMLK VSRYQTRTVA IMTALGIAAA ILAHTLASLT
GLSLLIHTTP WLFGTVQALG ASYLGYMGMG ALMSVRKQFL LRRELPFSAE STPTDVPHNP
DPVLSTAKGF RLGLYTNLLN PKALVFFLTL FSAMVGPDVN GPTRIALLVL MFTLSFAWFG
LLAVLLTKGS SQRTLVRMGP IIDLVTGVLF LMVSVAILYG LATEYWG
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