| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1524 |
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| Symbol | |
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| ID | 4603776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1853621 |
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| End bp | 1855477 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780874 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_927401 |
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| Protein GI | 119774661 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTGTA TGGATGCCAG CGAAATTCAG CCCCTAACCC AGTTTCTCAG GCAATTGGTC
CCTTTTGACT CTCTTTCGGA TGCTTCTTTG CTGGCCTGTG TGCGGCATCT GAGTGTGGCT
TACTACAGTA AATCCATGGG CCATGTTCCC CTTGATGAAT CCCATCCAAG GCTCTACATA
GTGCGTAGCG GTGCTTTTGA AGTGCGTGAT GAAGAGGGGG AGCTGGTTGA CCGCCTGGGG
GAAGGGGATT TCTTTGGTTT CCCGTCTTTG CTCAGTGGTG AGGCGATTTC CAATAAGGTG
GCCATTCTCG AAGATGGTCT GGTGTATCAA CTCAGTCCAG ATATGTTCAA CAGCTTACGG
CAGGAAAGCC GTGAATTTGA CCGCTTTTTT AACCGTGCTT TTGCCAAAAG GCTGCGCCAT
CAGGGCAGAT TCAAGGCCAA GGAACTCACC ACCACGAGCC GCATCAGCTC ACTGATGACG
GGTTCGCCGC TCACCATAGA TTGCAACCAC AGCATACGTC AGGCGGCGGT GATGATGCGG
GACGCTCGGG TGTCGTCGCT GCTGGTGACA GACCATCACA AACTCTGCGG CATTCTTACT
GACAGAGACT TGCGTAACCG GGTGCTCGCC GAAGGTTTTG ACGGCACACT GCCGGTGCAT
CAGGCCATGA CCCGAAACCC GGTGACCATA GGGGCTGGGG CCTTGGTATT TGAGGCCATG
CTCGCCATGA GCGAGCGCAA TATCCATCAT TTGCCTGTGC TCGAAGGGGA CACGCCGGTG
GGGGTGATAT CCAGCACCGA CATTCTGCGA AGTCAGGGCT CGCAACCGTT AATGCTGATT
GGCGAAATAG AGCGTCAAAA GGATGTGGCC AGTTTGATTT CAGTCAGCAA AAAAATCCCT
GAACTGCTTC AAAGCCTTAT CAGTGCCGAT GCCAGAGCCG AAGAAATTGG CCGGGTGTTG
ACGTCGGTGA CAGACGCCCT GACCAGAAGG CTGATATTAC TGAATCAGCA GATTTTGGGG
CAGGCGCCCA TGGCATTTTG CTGGCTCGCA TTTGGCTCCC AGGGGCGCCA GGATCAGGCC
GCCTGCTCAG ACCAGGATAA TGGGTTGCTG CTTGCTGGTG AGCCTGACGA GCATGCCGCC
GGCTATTTTG AGGCGCTGAG CCGCGCCGTT TGCAGTGGGC TTGATGAGTG CGGATACCGT
TTTTGTCCGG GCGATATCAT GGCGCAAAAT CCCAAATGGC GCATGTCACT GGCACGCTGG
CAACAGGTGT TTGACAACTG GGTTAAGGCG CCTGAGCCCA AGGCCTTGAT GCACGCCTCG
ATATTTTTCG ATATGCGGCC CGTGTTTGGT CCTCAAAGCC TGTTCGATGC GCTGCAGGAC
AAGGTGCTTG CCGGAACTAG GGACAATGAC ATTTTTCTCG CCGGCATGGC GGGTAACAGC
CTTACCGAGG CACCGCCCCT GGGGTTCTTT CGCAAGTTTG TACTTGAGCG GGACGGCTCC
GAGGTAAAAG GCATAGATTT AAAGCACAAA GGCAATGCTC TGATTAATGA CATTGCCCGT
GTATATGCGT TGTCAGCCGG CATCAAGGAG GTGAATACCG CCAAGCGTAT TCGCGCCCTG
ATGGAGCTGG GTGTGATTGG CCGCAAAGAT GCGCTTAATC TCGCCGATGC CCACGAATTT
ATTGCCCATA TGCGTCTTGC CAATCAGGGC GTGCAACACC GACAAGGTCA GGAAATCAGT
AACTACCTCA AGCCACAGCA GCTGTCTTCT CTGGTTCGCC ACCAACTGCG GGATGCATTC
AAAGTTGTGC ATGATGCCCA GTCGGGGCTC AGGCTTAAAT TTATGCGGAG CTTTTAA
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| Protein sequence | MICMDASEIQ PLTQFLRQLV PFDSLSDASL LACVRHLSVA YYSKSMGHVP LDESHPRLYI
VRSGAFEVRD EEGELVDRLG EGDFFGFPSL LSGEAISNKV AILEDGLVYQ LSPDMFNSLR
QESREFDRFF NRAFAKRLRH QGRFKAKELT TTSRISSLMT GSPLTIDCNH SIRQAAVMMR
DARVSSLLVT DHHKLCGILT DRDLRNRVLA EGFDGTLPVH QAMTRNPVTI GAGALVFEAM
LAMSERNIHH LPVLEGDTPV GVISSTDILR SQGSQPLMLI GEIERQKDVA SLISVSKKIP
ELLQSLISAD ARAEEIGRVL TSVTDALTRR LILLNQQILG QAPMAFCWLA FGSQGRQDQA
ACSDQDNGLL LAGEPDEHAA GYFEALSRAV CSGLDECGYR FCPGDIMAQN PKWRMSLARW
QQVFDNWVKA PEPKALMHAS IFFDMRPVFG PQSLFDALQD KVLAGTRDND IFLAGMAGNS
LTEAPPLGFF RKFVLERDGS EVKGIDLKHK GNALINDIAR VYALSAGIKE VNTAKRIRAL
MELGVIGRKD ALNLADAHEF IAHMRLANQG VQHRQGQEIS NYLKPQQLSS LVRHQLRDAF
KVVHDAQSGL RLKFMRSF
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