Gene Sama_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1479 
Symbol 
ID4603731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1790482 
End bp1790799 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content53% 
IMG OID639780829 
Producthypothetical protein 
Protein accessionYP_927356 
Protein GI119774616 
COG category[S] Function unknown 
COG ID[COG3784] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAT GGATAATGAT GACAGCCGCC GCCCTGCTTT CTTTCAATGT GTTTGCCATG 
GATCTGCAGC AGGCCAAATC GGACGGTTTT TTGGGCGAGC AGCAAAACGG TTACCTCGGC
CTGATAAAAG ACAACCCTGA GGCCCGCGCG CTGATGGAAG AAGTCAACAC CAAGCGCCGC
GCCCACTACG AAAAAATTGC CGCCAAAAAC AAGATTGCCA CCTCAGATGT GGCCAAACTC
GCCGCCGAAA AGGCCATCAA GGCAGCCGAC AAGGGCCACT TTATCCAGGA CCCATCGGGT
AAGTGGATAA AGAAATAG
 
Protein sequence
MKRWIMMTAA ALLSFNVFAM DLQQAKSDGF LGEQQNGYLG LIKDNPEARA LMEEVNTKRR 
AHYEKIAAKN KIATSDVAKL AAEKAIKAAD KGHFIQDPSG KWIKK