Gene Sama_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1413 
Symbol 
ID4603665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1716051 
End bp1716452 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content55% 
IMG OID639780763 
Producthypothetical protein 
Protein accessionYP_927290 
Protein GI119774550 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.584165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0202303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGC AAGGTGGTTG CCACTGCGGC AACATTCGTT ATCAGCTCAG CGCAGAGCCC 
TTTGATGCCG ACTATTGCCA TTGTCTGGAT TGCCAAAAGA CCTCAGGCGC CCCGTTTGGC
GCCTGGATGG ACTTTAAGGC GGAGCAGGTC AGCTGGCTTG CTGGTGAGGT AAAAGAATAC
GCCTCATCGG ACAATATCCG CCGTGGATTT TGTCCTGAAT GTGGCTGCAC CCTGACTTAT
CGCAGCACCC AATATCCCGA CTATCTGACC CTCAGCATCT GCTCTCTGGA CGACGCGTCG
GGCATCTCAC CCAAGTACCA CATCCATACC CAAAGCCGGC AGCCATGGCT GACTATCCAG
GACAATCTGC CGCGCTTTAT CAGATCCCGC TCACAAGGCT AG
 
Protein sequence
MNRQGGCHCG NIRYQLSAEP FDADYCHCLD CQKTSGAPFG AWMDFKAEQV SWLAGEVKEY 
ASSDNIRRGF CPECGCTLTY RSTQYPDYLT LSICSLDDAS GISPKYHIHT QSRQPWLTIQ
DNLPRFIRSR SQG