Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1413 |
Symbol | |
ID | 4603665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1716051 |
End bp | 1716452 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780763 |
Product | hypothetical protein |
Protein accession | YP_927290 |
Protein GI | 119774550 |
COG category | [S] Function unknown |
COG ID | [COG3791] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.584165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0202303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGGC AAGGTGGTTG CCACTGCGGC AACATTCGTT ATCAGCTCAG CGCAGAGCCC TTTGATGCCG ACTATTGCCA TTGTCTGGAT TGCCAAAAGA CCTCAGGCGC CCCGTTTGGC GCCTGGATGG ACTTTAAGGC GGAGCAGGTC AGCTGGCTTG CTGGTGAGGT AAAAGAATAC GCCTCATCGG ACAATATCCG CCGTGGATTT TGTCCTGAAT GTGGCTGCAC CCTGACTTAT CGCAGCACCC AATATCCCGA CTATCTGACC CTCAGCATCT GCTCTCTGGA CGACGCGTCG GGCATCTCAC CCAAGTACCA CATCCATACC CAAAGCCGGC AGCCATGGCT GACTATCCAG GACAATCTGC CGCGCTTTAT CAGATCCCGC TCACAAGGCT AG
|
Protein sequence | MNRQGGCHCG NIRYQLSAEP FDADYCHCLD CQKTSGAPFG AWMDFKAEQV SWLAGEVKEY ASSDNIRRGF CPECGCTLTY RSTQYPDYLT LSICSLDDAS GISPKYHIHT QSRQPWLTIQ DNLPRFIRSR SQG
|
| |