| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1362 |
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| Symbol | |
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| ID | 4603614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1652157 |
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| End bp | 1653326 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780712 |
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| Product | isovaleryl-CoA dehydrogenase |
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| Protein accession | YP_927239 |
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| Protein GI | 119774499 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.431847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACC TGTACTCTAC TCTCAACTTC GGACTCGGTG AAGACGTGGA TATGCTGCGG
GACGCGGTAT ACGAATTTGC CAAGGGTGAA ATTGCGCCGC TGGCGGAAAA GGTTGACCGC
GACAACGCCT TCCCCAACGA GCTGTGGGCC AAGTTCGGTG ACATGGGCCT GCTTGGCGTG
ACCGTGGCCG AAGAATACGG CGGCGTGAAC ATGGGTTACC TCGCCCACGT GGTGGCCATG
GAAGAAATCA GCCGCGCCTC GGCCTCCATT GGCCTGTCTT ACGGCGCTCA CTCCAACCTG
TGCGTTAACC AAATCTATCG CAACGGCAAT GAGGCCCAGC GTGCCAAGTA CCTGCCCAAG
CTCATCAGCG GTGAGCACAT TGGCGCCCTG GCCATGAGCG AGCCCAATGC CGGCTCCGAC
GTGGTATCCA TGAAGCTGCA TGCCCGCAAG GAAGGCGACC GCTATATCCT CAATGGCAAC
AAGATGTGGA TCACCAATGG CCCCGATGCC CACACCTATG TGATTTATGC CAAGACTGAC
CTCGACAAGG GACCACACGG CATCACCGCC TTTATCGTTG AGCGTGGATT CAAGGGTTTC
TCCCAGGCGC AAAAGCTCGA CAAGCTGGGT ATGCGCGGCT CCAACACCTG TGAGCTGGTG
TTTGAAGACT GTGAAGTACC GGAAGAAAAC ATCTTAGGCG GCCTCAACAA CGGCGTGAAA
GTGCTGATGA GTGGCCTCGA TTACGAGCGC GTGGTGCTCT CCGGTGGCCC ACTGGGCATC
ATGACAGCCT GTATGGATAT AGTCGTGCCT TATGTGCACG AGCGGGTGCA GTTTGGCAAG
TCTATTGGTG AATTCCAACT GGTGCAGGGC AAGCTTGCCG ACATGTACAC CGGCATGAAT
GCGGCCAAGT CTTACGTTTA CAACGTGGCC CGTGCCTGTG ACAGAGGCGA AACCACCCGT
AAAGATGCCG CCGGTGTCAT CCTATACGCC GCCGAATTGG CAACCAAGAT GGCGCTGGAC
GCCATTCAGC TGCTGGGCGG TAACGGTTAT GTGAATGAAT ATGCCACCGG CCGTTTGCTG
CGGGATGCCA AGCTGTATGA AATCGGCGCA GGCACCTCGG AAATCCGCCG CATGCTGATT
GGCCGCGAGC TGTTTAACGA GACTAAATAA
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| Protein sequence | MSHLYSTLNF GLGEDVDMLR DAVYEFAKGE IAPLAEKVDR DNAFPNELWA KFGDMGLLGV
TVAEEYGGVN MGYLAHVVAM EEISRASASI GLSYGAHSNL CVNQIYRNGN EAQRAKYLPK
LISGEHIGAL AMSEPNAGSD VVSMKLHARK EGDRYILNGN KMWITNGPDA HTYVIYAKTD
LDKGPHGITA FIVERGFKGF SQAQKLDKLG MRGSNTCELV FEDCEVPEEN ILGGLNNGVK
VLMSGLDYER VVLSGGPLGI MTACMDIVVP YVHERVQFGK SIGEFQLVQG KLADMYTGMN
AAKSYVYNVA RACDRGETTR KDAAGVILYA AELATKMALD AIQLLGGNGY VNEYATGRLL
RDAKLYEIGA GTSEIRRMLI GRELFNETK
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