Gene Sama_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1360 
Symbol 
ID4603612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1649591 
End bp1650421 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content59% 
IMG OID639780710 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_927237 
Protein GI119774497 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.687458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA TGACTTCCAT TGCCGAGCTG TCTGCCTCCT TCAGCCGCAT CCGCCTGGAG 
CTTAACGGCA GGGTGGGGTA TCTCATCTTA AATCGCCCCG AGGTGCACAA CGCCTTCGAT
GAGGTGATGA TTAGCGAAAT GACCCAGGCC ATCAACGCCT TCGCCCATGA GAGCGAGTGC
GCTGTAATGG TGCTTAAAAG CGACGGCAAG CACTTCAGCG CTGGCGCCGA CTTGAACTGG
ATGCGCAAGC AAGCCGCCAT GGACTTTGAC GACAACCTCA AAGATGCCCG CGAGCTTGCC
AACCTGATGG ATACCCTGGA CCGCTTCCCC AAGCCCTCCA TCGCCCTGGT AAACGGTGCA
GCCTACGGCG GCGCGCTGGG GCTGGTTTGC TGCTGCGATA TTGCGATTTC GAGCCACAAA
GCGAGTTTCT GCCTGTCTGA AGTCAAACTT GGCCTCATTC CGGCGGTGAT TAGCCCGTAC
GTGGTGCGCG CCATGGGACC ACGCCAGAGC CGCCGCTATA TGCTCACGGC TGAGCGCTTC
GATGCCAGCA TGGCGCTGGC CTTAGGCGTA GTGCATGAAA TCGCAGACGA TTTGGACGCT
GCAGCCGCGC CCATTATCCA AAATCTGCTG AGTGGCAGCC CCCAGGCGCT GGGGTGGTGC
AAATCGCTTA TTGCCCGTTT GCAAAGCGGC GTAATTGATG AGCACACCCG TGACTACACC
AGCGAGCGCA TCGCCCGCAT TCGGGTGTCC GCCGAAGGAC AGGAAGGCCT CAACGCCTTT
TTTGATAAGC GCAGCCCAGC GTGGGTTAAT GATACCGGCA GCAAGGACTA A
 
Protein sequence
MTTMTSIAEL SASFSRIRLE LNGRVGYLIL NRPEVHNAFD EVMISEMTQA INAFAHESEC 
AVMVLKSDGK HFSAGADLNW MRKQAAMDFD DNLKDARELA NLMDTLDRFP KPSIALVNGA
AYGGALGLVC CCDIAISSHK ASFCLSEVKL GLIPAVISPY VVRAMGPRQS RRYMLTAERF
DASMALALGV VHEIADDLDA AAAPIIQNLL SGSPQALGWC KSLIARLQSG VIDEHTRDYT
SERIARIRVS AEGQEGLNAF FDKRSPAWVN DTGSKD