Gene Sama_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1339 
Symbol 
ID4603591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1632573 
End bp1632758 
Gene Length186 bp 
Protein Length61 aa 
Translation table11 
GC content56% 
IMG OID639780689 
Producthypothetical protein 
Protein accessionYP_927216 
Protein GI119774476 
COG category[S] Function unknown 
COG ID[COG2835] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.736823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTG ATAAAAAACT CCTGGAAATC GTTGCTTGCC CCGTGTGCAA GGGCAAGCTG 
GAATACGACA AGGCGGCAGA GCAGCTGATC TGTAAGTTCG ACCGACTGGC CTATCCCATC
ACCGAGGGGA TCCCGGTACT GTTGGAAAAC CGTGCCACGC CCTGGCAGGA GCAAACTGCC
GAGTGA
 
Protein sequence
MAFDKKLLEI VACPVCKGKL EYDKAAEQLI CKFDRLAYPI TEGIPVLLEN RATPWQEQTA 
E