| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1338 |
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| Symbol | lpxK |
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| ID | 4603590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1631534 |
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| End bp | 1632583 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780688 |
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| Product | tetraacyldisaccharide 4'-kinase |
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| Protein accession | YP_927215 |
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| Protein GI | 119774475 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
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| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.82976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGTT TTGTGCACAA AATCTGGTAT CAGGGGCACC CGGCAGCCTG GCTGCTGTTG
CCCCTGTCGC TGCTGTTTTG GCTGGTCAGT AGTCTGCGCC GTGCGGCCTT CAGGTTGGGG
CTTAAGCGCA GCGAGCGCTT ACCTGTGCCC GTGGTGGTGG TGGGTAATAT CACCGCCGGT
GGCAGCGGCA AAACCCCCAC AGTGCTCTAT CTTATTGAGC TGCTGCGCCG GGAAGGCTGG
CGCCCCGGCG TCATAAGCCG TGGCTATGGC GCCTCCTTTG ACGGTGAGTT GGACGTAGTC
GCAGGCATGT CACCCGCCCA AGTGGGGGAT GAGCCTGCCA TGATAGCCAT GCGCACCGGC
ATCCCTATGG TCGTGGGACG AAACCGTATC AAGGCTGCCC ATAAGCTGCT GCAATGCCAC
GATGTAAACG TGATTCTGTG CGACGACGGC CTGCAGCATT ACGCCCTCGA GCGGGATGTC
GAAATATTGG TGATTGATGG CGAACGCCGC TTTGGCAATG GCTGGCTGTT GCCTGCGGGG
CCGCTGCGAG AAGGTGCATG GCGTAAAAAT TCGGTGAATT TTGTGCTCTG CAATGGCGCG
AGCGCAGAAG CAGACGAATA TGCCATGACC CTGGAACCAA CTGGCCTTGT CGCGGTAGCC
GCTATTCACG GCAAGTCTCA AGCCAAGGAC AACAGCCACA ATGCGCAGGA TAATGCGACG
CCGCGCCCCG GGGATACCGT GAACGCCATG GCGGGCATTG GCAACCCACA GCGTTTTTTC
TCGACCCTGA TGGCTCAGGG CTTTGTGCTT GAAAAGGCCC ACGAATTTGC CGACCACATG
GCCTTCAGTG AAACGGATAT CGCCACCATC GACGATGGTC GCCCACTGCT GATGACCGAA
AAAGATGCGG TTAAATGTCG CGAATTTGCC AAACAACACT GGTGGTATCT CGCGGTTGAT
GCGAATCTAC CGCCAACATT TTCAACCAGG CTGCTCGATG CCCTGAACCG GGCGGCCACA
GCCAAGCAAG GAAACACCCA TGGCCTTTGA
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| Protein sequence | MQSFVHKIWY QGHPAAWLLL PLSLLFWLVS SLRRAAFRLG LKRSERLPVP VVVVGNITAG
GSGKTPTVLY LIELLRREGW RPGVISRGYG ASFDGELDVV AGMSPAQVGD EPAMIAMRTG
IPMVVGRNRI KAAHKLLQCH DVNVILCDDG LQHYALERDV EILVIDGERR FGNGWLLPAG
PLREGAWRKN SVNFVLCNGA SAEADEYAMT LEPTGLVAVA AIHGKSQAKD NSHNAQDNAT
PRPGDTVNAM AGIGNPQRFF STLMAQGFVL EKAHEFADHM AFSETDIATI DDGRPLLMTE
KDAVKCREFA KQHWWYLAVD ANLPPTFSTR LLDALNRAAT AKQGNTHGL
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