Gene Sama_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1317 
Symbol 
ID4603569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1601151 
End bp1602455 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content54% 
IMG OID639780667 
Productinosine kinase 
Protein accessionYP_927194 
Protein GI119774454 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.110891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.220477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTC CTGGCCAGCG CAAGTCAAAA CATTACTTCC CCGTGAATAC CCGAGATCCG 
CTGCTTGAGC AGTTGACTCA GCAACCTCAG CCAAAGCAGA CCTATATCAG TGGTATTGAC
CAGACCCTGG TGGACATTGA AGCCAAGGTC GCCGAAGACT TGTTGGTGCG TTATCAGTTG
CCAAAAGGTA ATTCCACCCT GATTGATGAC GCCACCGCCC ACGCGCTCTA TGAGGAGCTC
AAGCGTGATA ACCTTATCAG CGACGAGTTT GCCGGTGGCA CTATTGGTAA CACAGTACAC
AACTACTCTA TTTTGGCTGA TGATCGCTCA GTGCTGTTTG GGGTAATGAG CAAGTCTATC
GAAGTGGGCA GCTACGCCTA TCGTTACCTC TGCCACACCT CATCCAAGGT CGATTTGAAT
CACTTGCAGC CGGTAGACGG GCCTATTGGC CGCTGTTTTA CCCTGATTTC AGATTGCGGT
GAGCGTACCT TTGCCATCAG CAAAGGCGCC ATGGACAAGC TGACGCCGGA CTTTATCGAT
AAGGATGTGG TGCAGGGCAG TGCGGCGCTG GTACTGACGG CCTACCTGAT GCGGGCGGCC
GAAGGTGATG GCATGAGCCA GGCAGCACTC AAAGCCATCG AATACGCCAA GGCAGCCGAT
GTCCCAGTGG TGCTGACTCT CGGTACCCGC TTTCTTATTC AGGAAGATCC AGAGTGGTGG
CAGGGCTTTA TTCGTGACAA CGTCACCATA TTGGCGATGA ACGAAGATGA AGGTGAAGCC
CTGACGGGCT TTGCCGATCC CCTCCTTGCC AGTGAGGCTG CGCTGGAGTG GTGTGACATG
GTGCTGACAA CGGCGGGTCC CATAGGTCTT TATACTGCAG GTTACACCGA AGACAGTGAC
AAGCGTGAAA CCAGCCATAC GCTGCTGCCT GGTGCGATTC CCGAGTTCAA CCGCTTTGAG
TTTTCCCGTC CGATGCGTAA GCGTGATTGC CGAGAGCCCA TAAAGGTGTA TGCGCATATT
TCGCCCTATA TGGGAGGCCC GGAACAAATC CGCAATACCA ATGGCGCTGG TGATGGTGCA
CTGTCAGCAC TGCTCCATGA CCTGGCGGCG AATAATTTCC ACAAGGTTAA TGTTCCCGGC
TCCAGTAAAC ACAGAAACGA AGGCCTCTGC TATTCGTCAT TCTCACAAAT CTGCAAGTAC
GCCAACCGTG TTGCCTATGA AGTGCTGGCG CAGCACAGCC CGCGTTTATC CAGAGCTTTG
CCGGAGCGGG AAGACAGCCT GGAAGAGTCT TATTGGGAGC GTTAA
 
Protein sequence
MKFPGQRKSK HYFPVNTRDP LLEQLTQQPQ PKQTYISGID QTLVDIEAKV AEDLLVRYQL 
PKGNSTLIDD ATAHALYEEL KRDNLISDEF AGGTIGNTVH NYSILADDRS VLFGVMSKSI
EVGSYAYRYL CHTSSKVDLN HLQPVDGPIG RCFTLISDCG ERTFAISKGA MDKLTPDFID
KDVVQGSAAL VLTAYLMRAA EGDGMSQAAL KAIEYAKAAD VPVVLTLGTR FLIQEDPEWW
QGFIRDNVTI LAMNEDEGEA LTGFADPLLA SEAALEWCDM VLTTAGPIGL YTAGYTEDSD
KRETSHTLLP GAIPEFNRFE FSRPMRKRDC REPIKVYAHI SPYMGGPEQI RNTNGAGDGA
LSALLHDLAA NNFHKVNVPG SSKHRNEGLC YSSFSQICKY ANRVAYEVLA QHSPRLSRAL
PEREDSLEES YWER