| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1303 |
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| Symbol | |
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| ID | 4603555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1587305 |
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| End bp | 1588273 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780653 |
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| Product | NifR3/Smm1 family protein |
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| Protein accession | YP_927180 |
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| Protein GI | 119774440 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0734085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGATA TCAGCTTGCG GATTATTTTG GCCCCTATGG AGGGCGTGCT GGATCATTTG
ATGAGGGAGC TGCTCTCATC CATCAACCCC TACGATCTCC TGGTTACCGA GTTTGTGCGC
GTGGTGGATC AGCTATTACC GGAAAAGGTC TACTATCGCC TCTGTCCTGA GCTGAAAAAC
AACGGCCTGA CCAAGAGTGG TACCCCGGTT CGGGTTCAGA TATTGGGTCA GGAACCCGGT
TGGATGGCTG AAAACGCGCT GCGGGCGGTG ACACTGGGCT CCCGAGGTGT AGATGCCAAC
TTTGGCTGCC CGGCCAAAAT GGTTAACCGC AGCAAGGGTG GTGCCGTGCT GCTGCAATAT
CCCGAATTAA TTCACGATAT TGTCAAAGCC ATGCGTCAGG CTGTGCCCAG CGAGCAGCCG
GTCACCGCCA AAATTCGTTT AGGGTACGAA GACAAATCTC TGTTTATGGA AAACGCCCTG
GCCGTATACG AGGCCGGCGC CACCGAGCTT GCCATTCATG CCCGCAGCAA GGTAGACGGT
TACAAACCGC CCGCCTATTG GGAGTACATT ACCGAGGTGC GTGAGCGCTT GCCCATTCCG
GTCATCGCCA ACGGCGAAAT CTGGAACCGT GACGATGCCC TGCGCTGCAT GGAAGTAACG
GGCTGCGACA GCATCATGAT TGGTCGGGGT GCCTTGTCAA TGCCAAACCT GGCTGCCAGC
ATTAAGGGTG ACACACCCTA TGATTGGGCC ACAACGCTGA GATTGATGAT CCACTACTCA
GAGCTGGAAA CCTCAGGACT GAAGGCCACT TATTATCCGG CACGTATCAA ACAGTGGTTC
AGTTACCTGA GCAGGGAATA TCCGGAAGCG GACGACCTGT TCAGGGAAAT ACGAATTCAC
AAAACCACCG AGGACATACT GAATGGCCTC AAACTGGCAG CCACCAAGCT GGCGCCAATG
AAGTCATAA
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| Protein sequence | MRDISLRIIL APMEGVLDHL MRELLSSINP YDLLVTEFVR VVDQLLPEKV YYRLCPELKN
NGLTKSGTPV RVQILGQEPG WMAENALRAV TLGSRGVDAN FGCPAKMVNR SKGGAVLLQY
PELIHDIVKA MRQAVPSEQP VTAKIRLGYE DKSLFMENAL AVYEAGATEL AIHARSKVDG
YKPPAYWEYI TEVRERLPIP VIANGEIWNR DDALRCMEVT GCDSIMIGRG ALSMPNLAAS
IKGDTPYDWA TTLRLMIHYS ELETSGLKAT YYPARIKQWF SYLSREYPEA DDLFREIRIH
KTTEDILNGL KLAATKLAPM KS
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