| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1297 |
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| Symbol | hscA |
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| ID | 4603549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1582456 |
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| End bp | 1584315 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780647 |
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| Product | chaperone protein HscA |
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| Protein accession | YP_927174 |
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| Protein GI | 119774434 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR01991] Fe-S protein assembly chaperone HscA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0167807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTAT TGCAAATCGC CGAGCCCGGC CAAAGCGCCG CGCCCCACCA ACACAGACTC
GCAGTCGGTA TCGACCTTGG CACCACCAAC TCTTTAGTGG CCGCGGTGCG AAGCGGTGAA
GCCAGAACCC TGGCGGATGC CCAGGGCCGC CACTCTTTGC CCTCTATCGT GCGTTATGCA
AAGGAGGGTA TTTCCGTTGG CCAGGAAGCC GAACTGCACA GCGCCACCGA TGCCGCCAAT
ACCATAGTCT CTGTAAAACG CTTTATGGGC CGCAGCCTGG CGGATATTGA GGCTGGCAGT
CAGCGTTTCC CTTATCAGTT CAGCGCCAGT GAAAACGGCT TGCCCCTGTT TAATACCCCT
CAGGGACAGG TGAACCCGGT ACAGGTGTCG GCCGAAATTC TGCGTCCGCT TATCGCCCGC
GCCGAAGATA CCCTTGGCGG AAGCCTGGAA GGTGCCGTGA TTACTGTGCC TGCCTACTTC
GATGATGCTC AGCGTCAGGG GACAAAGGAC GCGGCGCAGC TTCTGGGTGT GAAAGTCCTA
CGATTGCTCA ACGAGCCCAC TGCTGCTGCC ATCGCCTATG GTTTGGACTC AGGTCAGGAA
GGCGTTATCG CCGTATATGA CCTCGGCGGC GGTACCTTTG ATATTTCCAT TTTGCGTCTG
AACCGCGGTG TGTTTGAAGT TTTGGCCACC GGTGGTGATT CTGCCCTTGG CGGCGATGAT
TTCGATCATC TGCTTGGCGG ATATCTTGCT CAGCAATGGG GGCTGGATCT GGCCGATACT
GGCCTCGGTC GTAAGCTGAT GATCGAAGCC CGCAGAGTGA AAGAAGCTCT GACAGAGACA
GATACCGTCA CTGCGACTCT CGAGTATCAG GGGCAGGCTT ACCATCACGA CATCGACCGC
GGGACCTTCG ATGCCCTGAT CGCCGCCTTG GTGAAAAAGA CCATCGCCGC CTGTCGCCGC
GCGCTGCGTG ATGCGGGTAT CGATGCTGGC GAAGTGCTGG AAACCGTGAT GGTAGGCGGC
TCGACCCGGG TGCCGTTGGT GCGTTCAGAA GTCGAAGCCT TCTTTGGTAA GGCGCCACTG
ACCAGCATTG ACCCTGACCG GGTGGTAGCC ATTGGCGCCG CCATTCAGGC GGATATTCTG
GTTGGTAATA AACCCGAGTC GGATTTGCTG CTGTTGGATG TGATCCCGCT GTCGCTGGGT
ATTGAGACCA TGGGCGGTTT GGTGGAGAAA ATCGTTTCCC GCAATACCAC CATTCCCGTT
GCCCGCGCGC AGGAATTTAC CACCTTTAAG GACGGCCAAA CTGCCATGGC CTTCCATGTG
GTACAAGGCG AGCGTGAGCT GGTACAGGAT TGCCGCTCAT TGGCACGCTT TACCCTGAAG
GGGATACCAC CGCTTGCTGC CGGCGCCGCC CATATTCGGG TCACTTTCCA GGTGGATGCT
GATGGATTGC TCAGTGTCAC CGCCATGGAA AAGTCCACCG GGGTGAAATC CAGCATTCAG
GTGAAGCCTT CTTTTGGCCT GTCTGACACC GAAATCGCCA CCATGCTCAA GGATTCCATG
AAGCATGCCA AGGAAGACAT CAGTCGCCGT ATGCTGGCCG AGCAACAGGT AGAAGCTGCA
CGGGTGCTGG AGTCCCTGCA TTCGGCGCTC GCCAAAGATA AGGTGCTGCT GTCTGAGGAA
GAGCTAAACG ATATCACCGC GGCCATGGCC GAACTTGCCG AAGTGGCCAA AGGCGATGAT
GCCGATGCTA TTTTGGCGGC CATTGAGCGA CTGGACAACC AAACCCAGGA GTTTGCCGCC
AAACGTATGG ACAATTCTAT CCGCAATGCC CTCAAGGGCC AGTCGGTCGA CACTATATAG
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| Protein sequence | MALLQIAEPG QSAAPHQHRL AVGIDLGTTN SLVAAVRSGE ARTLADAQGR HSLPSIVRYA
KEGISVGQEA ELHSATDAAN TIVSVKRFMG RSLADIEAGS QRFPYQFSAS ENGLPLFNTP
QGQVNPVQVS AEILRPLIAR AEDTLGGSLE GAVITVPAYF DDAQRQGTKD AAQLLGVKVL
RLLNEPTAAA IAYGLDSGQE GVIAVYDLGG GTFDISILRL NRGVFEVLAT GGDSALGGDD
FDHLLGGYLA QQWGLDLADT GLGRKLMIEA RRVKEALTET DTVTATLEYQ GQAYHHDIDR
GTFDALIAAL VKKTIAACRR ALRDAGIDAG EVLETVMVGG STRVPLVRSE VEAFFGKAPL
TSIDPDRVVA IGAAIQADIL VGNKPESDLL LLDVIPLSLG IETMGGLVEK IVSRNTTIPV
ARAQEFTTFK DGQTAMAFHV VQGERELVQD CRSLARFTLK GIPPLAAGAA HIRVTFQVDA
DGLLSVTAME KSTGVKSSIQ VKPSFGLSDT EIATMLKDSM KHAKEDISRR MLAEQQVEAA
RVLESLHSAL AKDKVLLSEE ELNDITAAMA ELAEVAKGDD ADAILAAIER LDNQTQEFAA
KRMDNSIRNA LKGQSVDTI
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