| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1280 |
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| Symbol | |
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| ID | 4603532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1568982 |
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| End bp | 1570415 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780630 |
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| Product | carbon starvation protein |
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| Protein accession | YP_927157 |
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| Protein GI | 119774417 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.513544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00159846 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTTGGT TTTTACTCTG TGTCGGCCTG CTTCTCGTCG GCTACTTTGT TTACGGCGCC
TTCGTCGAGA AGGTATTCGG AATTAACGCC AAACGGCAAA CCCCGGCGTT TGCCCAAACC
GATGGCGTGG ACTATGTGCC CATGTCCAAA GGCAAGGTCT ATCTGATCCA ACTGCTGAAT
ATCGCCGGTG TCGGCCCCAT CTTCGGCCCG ATCCTCGGTG CCCTATACGG CCCAGCCGCC
ATGTTGTGGA TTGTGATTGG CTGTATTTTT GCCGGTGCGG TACACGACTA CTTCTCCGGT
ATGCTGTCGG TGCGAAACGG TGGCCAGTCT GTGCCCAACC TTGCCGGTAA ATACCTGGGT
AAAAGTGCTA AACACTTTAT GAACGTGTTT GCCACCATTC TGCTGCTGCT CGTGGGTGTG
GTATTTATTT CCGCTCCAGC GGGCCTGCTT GGAAAACTCA CTGGCCTTAG CGTCAGCCTG
TTTGTGGGCA TCATTTTCGT TTACTACCTG ATTGCGACCA TTGTGCCGGT AGACAAAATC
ATCGGTCGTC TGTACCCCTT CTTCGGCGCC CTGTTGCTGT TTATGTCTGT GGGTCTGACT
GTGGCACTCA TCGTCTCTTC TGAGCACAGC TTGCTGCCCG GTGTTGAAGC CTCTGATTTC
CTCACCAACC TCAACCCCAA TGACATGCCA CTGTGGCCTG CTCTCTTTAT CACCATCGCC
TGCGGCGCCG TATCTGGCTT CCACGCCACT CAGTCTCCCC TGATGGCACG CTGCATGGAA
AACGAAACCA ATGGCCGCTT TGTGTTTTAC GGCGCCATGA TTGGTGAAGG CATCATCGCC
CTTATTTGGT GTGCCATTGC CCTGTCGTTC TTCGGAGGTG TTGAAGGCCT GGCAACCGGT
ATGGCCGGTA ACCCTGCCAA CGTGGTGTAC GAAGCGTCTA CCGGCCTGCT GGGTGCAGTG
GGTGGCTTTA TGGCGGTGCT TGGAGTGATT ATTCTGCCCA TTACCTCTGG TGATACTGCA
TTCCGTTCAG CGCGTCTTAT CCTGGCTGAA TTCTTCAACA TGCCACAAAC CCAACTGCCT
AAGCGATTGA TGCTGGCCAT CCCGCTGTTC GTGCTGGGCG GCATACTGAC TCAGGTCGAT
TTCGGTGTGA TCTGGCGTTA CTTCGGTGTG GCTAACCAGG CAACAGCCGT GCTGATGCTG
TGGACTGCCT CAGCCTATCT GCTGCGCCAC AACAAGCTGC ACTGGATTTG CACCATTCCG
GCCATGTTCA TGACCTCAGT GGTAGTGACC TTCCTGCTGA ACTCCGCAAC CCTGGGTGCA
GGCCTGCCAA TGACCATCTC CACGGTCGTG GGTGTGCTGG TCGCCTTCGC AGTGGCTACG
CTGCTGGTGA TTAAAATCAA GGGTAAATCG GTGGAACTGG CTGAAGAAGC CTAA
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| Protein sequence | MTWFLLCVGL LLVGYFVYGA FVEKVFGINA KRQTPAFAQT DGVDYVPMSK GKVYLIQLLN
IAGVGPIFGP ILGALYGPAA MLWIVIGCIF AGAVHDYFSG MLSVRNGGQS VPNLAGKYLG
KSAKHFMNVF ATILLLLVGV VFISAPAGLL GKLTGLSVSL FVGIIFVYYL IATIVPVDKI
IGRLYPFFGA LLLFMSVGLT VALIVSSEHS LLPGVEASDF LTNLNPNDMP LWPALFITIA
CGAVSGFHAT QSPLMARCME NETNGRFVFY GAMIGEGIIA LIWCAIALSF FGGVEGLATG
MAGNPANVVY EASTGLLGAV GGFMAVLGVI ILPITSGDTA FRSARLILAE FFNMPQTQLP
KRLMLAIPLF VLGGILTQVD FGVIWRYFGV ANQATAVLML WTASAYLLRH NKLHWICTIP
AMFMTSVVVT FLLNSATLGA GLPMTISTVV GVLVAFAVAT LLVIKIKGKS VELAEEA
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