| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1232 |
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| Symbol | |
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| ID | 4603484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1516343 |
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| End bp | 1517350 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780582 |
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| Product | peptide ABC transporter, ATP-binding protein |
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| Protein accession | YP_927109 |
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| Protein GI | 119774369 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTAC TGGATATTCG CAATCTCACC ATCGAACTCG ACACCCCACA CGGGCGGGTC
AAGGCACTGG AAAAAGTCAG CCTGATGCTC CATGCCGGAG AAATTCATGG CTTGGTGGGC
GAGTCGGGCT CGGGTCGCAG TCTGCTTGCC CGGGCCGTTC TGGGGATCCC GGGTCCCAAC
TGGACCATTA CTGCCGATCG CATGATGTGG GATGGCCGAA ACCTCATGGA AATGAGCGAT
GTCGAACGCC GCAATCTTAT GGGCAAAGAC ATGGCGATGA TATTTCAGGA CCCTTCCGGT
AGCCTCGACC CGGTGATCAC CATAGGTGCC CAGCTGATTG AAGCCATGCC CGCCGACAAG
AATGTGCCCT TCTGGCGACG TGGTCGTGAG CGGCGTCTGA CGGCACAAAA ATGGCTGCAT
AAGGTGGGTA TCAAGGATCC CAAACGGGTG ATGGCCTCCT ATCCCTGGGA AACCTCAGAA
GGCGAATGCC AAAAGGTGAT GATTGCCATG GCGCTGGCCA ATCAGCCCAG ATTGCTGATT
GCCGATGAAC CGACCAACTC AATGGAACCC AGCACCCAAG CCCAGATTTT CCGCCTCCTG
GCACAGCTCA ATCAGCTGCA GGGGGTAACC ATTATGATGA TCAGCCATGA GCTTGAGACC
CTGGCGGACT GGTGCAATAA CCTCACAGTG CTTTACTGCG GTCAGGTGAT GGAATCCGGT
CCCATTGATG AGCTTATCCG TGAGCCGCTG CACCCCTATA CCAAGGCGCT GATGGATCAC
CTTCCCGATT ACCGTGGCAA CCTGCCTCAC AAGAGCCTGA TGCCGGTATT GCCCGGGTCG
GCGCCGGCCT TACAGCATTT ACCCATAGGT TGCCGCCTGG GTCCACGCTG CCCGGAAGCC
AGACGCGAGT GTGTCCATCA GCCTCAGCTG CAACATCAAA AAGACAGATA TTATGCCTGT
CACTTCCCTT ATCGCACGGA GACGAATAAT GACGACACCG CTGCTTAA
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| Protein sequence | MPLLDIRNLT IELDTPHGRV KALEKVSLML HAGEIHGLVG ESGSGRSLLA RAVLGIPGPN
WTITADRMMW DGRNLMEMSD VERRNLMGKD MAMIFQDPSG SLDPVITIGA QLIEAMPADK
NVPFWRRGRE RRLTAQKWLH KVGIKDPKRV MASYPWETSE GECQKVMIAM ALANQPRLLI
ADEPTNSMEP STQAQIFRLL AQLNQLQGVT IMMISHELET LADWCNNLTV LYCGQVMESG
PIDELIREPL HPYTKALMDH LPDYRGNLPH KSLMPVLPGS APALQHLPIG CRLGPRCPEA
RRECVHQPQL QHQKDRYYAC HFPYRTETNN DDTAA
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