| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1230 |
|---|
| Symbol | |
|---|
| ID | 4603482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 1514278 |
|---|
| End bp | 1515480 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639780580 |
|---|
| Product | trans-2-enoyl-CoA reductase |
|---|
| Protein accession | YP_927107 |
|---|
| Protein GI | 119774367 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3007] Uncharacterized paraquat-inducible protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCA AACCAAAAAT TCGTGGATTT ATTTGTACCA CCACTCATCC GGTAGGCTGT
GAAGCCAATG TGCTGGAACA GATTAATCTG ACCAAGGCCC GAGGCCCCAT CGTCAATGGT
CCCAAGCGCG TGCTGGTTGT TGGCTCCTCC AGTGGCTACG GTCTGTCTTC CCGCATCGCG
GCAGCTTTTG GCAGCGGTGC AGCCACCATA GGCGTGTTCT TTGAAAAGCC AGGTACCGAG
TCCAAACCCG GTACTGCAGG CTGGTACAAC TCCGCCGCCT TTGACAAGTT TGCCAAAGCC
GAAGGCCTGT ACAGCAAGAG CATCAACGGC GATGCCTTCA GCCATGAAGC CAAAGCCAAG
GCGATTGAGC TGATTAAAGC CGATCTGGGT CAAATCGACA TGGTGGTGTA CTCGCTGGCA
TCGCCCGTGC GTAAACTCCC TGACAGTGGT GAGCTGGTGC GCTCATCACT GAAGCCAATC
GGCCAGCCAT ACAGCTCTAC CGCAGTGGAC ACCAACAAAG ACACCATTAT CGAAGCCAGT
GTTGAACCCG CCACCGAGCA GGAAATTGCC GACACTGTAA CCGTAATGGG TGGTCAGGAT
TGGGAACTGT GGCTCAACGC TCTGGATGAA GCCGGTGTTC TGGCCGAAGG CTGCAAGACA
GTAGCTTACT CCTACATTGG TACTGAGCTG ACCTGGCCTA TCTACTGGCA TGGCGCACTG
GGTAAGGCCA AAATGGACCT CGACCGCGCC GCCCACGCCC TGAACGACAA GCTGGCAGCC
AAAGGCGGCA GCGCCAACGT GGCTGTTCTC AAGAGCGTGG TCACTCAGGC TTCTTCTGCC
ATTCCCGTGA TGCCACTGTA CATCGCCATG GTATTCAAGA AGATGCGCGC CGAAGGTCTG
CATGAAGGCT GTATGGAACA AATCCTGCGT ATGTTCTCTG AGCGCCTGTA CAAAGCCGAT
GGCAGCGCGC CTGAAGTAGA CGAAGACAAC CGTCTGCGTT TGGATGACTG GGAGCTGCGT
GATGACATTC AACAGCATTG CCGCGATCTT TGGCCTCAGA TCACCACCGA AAACCTGCCT
GAGCTGACCG ACTACTTCGA GTACAAGGCC GAGTTCATCA AGCTGTTTGG CTTTGGTATT
GAAGGCATCG ACTACGATGC AGACGTCAAT CCTGAAGTTA ACTTTGATGT GATTGAGCTG
TAA
|
|---|
| Protein sequence | MIIKPKIRGF ICTTTHPVGC EANVLEQINL TKARGPIVNG PKRVLVVGSS SGYGLSSRIA
AAFGSGAATI GVFFEKPGTE SKPGTAGWYN SAAFDKFAKA EGLYSKSING DAFSHEAKAK
AIELIKADLG QIDMVVYSLA SPVRKLPDSG ELVRSSLKPI GQPYSSTAVD TNKDTIIEAS
VEPATEQEIA DTVTVMGGQD WELWLNALDE AGVLAEGCKT VAYSYIGTEL TWPIYWHGAL
GKAKMDLDRA AHALNDKLAA KGGSANVAVL KSVVTQASSA IPVMPLYIAM VFKKMRAEGL
HEGCMEQILR MFSERLYKAD GSAPEVDEDN RLRLDDWELR DDIQQHCRDL WPQITTENLP
ELTDYFEYKA EFIKLFGFGI EGIDYDADVN PEVNFDVIEL
|
|---|
| |