Gene Sama_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1217 
Symbol 
ID4603469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1498901 
End bp1499497 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content49% 
IMG OID639780564 
Producthypothetical protein 
Protein accessionYP_927094 
Protein GI119774354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.431766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACTGA ATCACTTATT GGGGCTATAC ACTCATCCAA AAGAAGAGTG GCACACAATT 
GAAAAGAACC ACGAAGCACT GAAAAGCAGC ATGAGTCATC TTTTGCTCAT CGCACTCATT
CCACCTATTT GCAGTTACTT TGCCATGGCC CATATCGGCT GGAATCCGGG CGCAGGAGAG
CCTTTATTCC TGACCAGTCA AAGTGCCATT TATATGTCCG TTGGTATGTA TTTTGGCTTG
ATAGCCGGTG TATTTGGACT TGCCTACCTG GCACATTGGA TGGCCATTAC CTTCGATGCC
AAACCTGACT TTACCCAAGC TCTCGAATTG GCAACCTACA CTGCCACCCC CCTCTTTATG
GTGGGCCTGT CGGCGCTCTA TCCTGTGCTT TGGTTTATGA TGGTGGTTGG CCTGATTGGT
CTGGCTTACT CGGTTTACCT GCTATACACC GGCGTACCCA TTATCATGAA CATCCCTGAA
GAAAAAGGCT TTATTTACGC GAGTTCTGTG GTGACCGCAG GTCTTGTTTT GCTGGTTGCT
CTGATGGCTG GCAGCGTAAT TTTGTGGAGC CTGGGCTTTG GCCCAATGCT GCAGTAA
 
Protein sequence
MVLNHLLGLY THPKEEWHTI EKNHEALKSS MSHLLLIALI PPICSYFAMA HIGWNPGAGE 
PLFLTSQSAI YMSVGMYFGL IAGVFGLAYL AHWMAITFDA KPDFTQALEL ATYTATPLFM
VGLSALYPVL WFMMVVGLIG LAYSVYLLYT GVPIIMNIPE EKGFIYASSV VTAGLVLLVA
LMAGSVILWS LGFGPMLQ