| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1212 |
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| Symbol | |
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| ID | 4603464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1491000 |
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| End bp | 1493096 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780559 |
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| Product | outer membrane protein, putative |
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| Protein accession | YP_927089 |
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| Protein GI | 119774349 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCC ATTTCTCCCC CACGCTGAGC CTGATAGCTT CCGCCATACT CCTGGGGATG
TCCGGACAGG TCTTGGCGGG TTACGGCTTG AAAGACGCCA ACCGCAGCAC AGTAAAAAAA
GAAGCCTGGG TTTGCAAAGG ATGTGAAATC AAGTCGGAAT CCACCTCAGC CATCACCGCC
GGCGTAGCCT GGCAGGACGG CGAAAACAGC CACTTTGCCA ACACCACAGG CACAGACGCC
GATGGAGCCA CCGGTTTTGT CAGCGCCGAC ATTCAACACC GCGGCGACAA GGATTACCGA
CTCGACTTCC AGGCCGACAA GCTGGGATTT GATGCATCCA GCGCCAGGCT CGCCATCAAA
AAGCCCGGCC ACTACCAGTT TTATCTCGAC TATCGTGCGC TCGCCCGGTA CGACACCAAT
CAAGGCGTAA CGCCTTACAG CGCTGAGGGC GACCTGCTGG TATTGCCGGA TAACTGGCAA
ACCGCCGGCA CCACCGCAGG CATGACACGG CTGCAGGATG CACACACGGT GAAACTGGAG
AAAAAACGTC AGCGCTTTGA ACTTGGCGGT GCCGTTACCG GTGACAGTTT TACCAGTGAA
CTCAACTTTC GGCACGAAAC CCGCGAAGGC GCCCAGCGAA GCAGCGTTAA CCTGCTGACC
AATGCTGCCA TGGTTGCCAA ACCCATAGAC GACAGCACAG ACACCCTCGA TGCCAAGGTA
TATTGGCGCG GTGACAGGTT TTTGGGTGGC ATCAACGGCC AGATAAGCAA ATACAGTAAC
GATCATCAGC GTCTTGCATT CGACAACGCC TTCTACCCTA CCTTTGGTGC AGCCTATAAC
GGGCAAATGG CGGTTGATCC AGATAATCAG GCGTTTAGCC TGGGAACCGA CCTGCAGTTT
TTTGAAGGGG CGCAGCAGGC CATTATGCGA GCACGCTTCA GCCACCTGAC CCAGGATGAG
CCGCTGCTGA ATGCCACAGT AACCGGCCCA TCTCCTGCAT TGCCTGTCAT GAGCCCGGAT
ACTCAGGTGG ACCTGATGGA GCTGGGGCTT GCATACAGCA ACAGGCTCAG CCGGGAATTC
TCGGTGCGCG CCTCATATGA TTTTCGCGAC CGCGACAATA AAACCCCCGA GTACCTCTAC
CCACTGGTCA CAACCGACAG CATCTATCGT GGTGAGTACT ACAACAAAGG CTACGACAGA
ACCCGCCAGC TGCTGAAACT GGGTGCAAAA TACCGCTTCA GCCGCCAATG GGATCTGGAC
ACCCTATACC GCTACGACCA CAACAGTTAC AGCGAACTAA GCCGGGACTC GGTATTCGAA
AACCACGTCG AGGCCACTGT TCGGGGGCAG ATTATGGCAG GCTGGCGCGT CAGTCTTAAA
GGCGAAGTCA GCGCCCGTCG TGGTGATAGC TACCAGACCA GCAGCAACAC CCAGATGCCA
AATCAGAGCG CCATGCGCCA GTATTTTCTT GCCGACAGGG ACAAGCGCGA ACTTCGCTTG
ATGACAGACC ATTATTTCGC GGATGTATCG CTGCAATTCA ATGTCCACTC GGGCAACGAA
GACTACAGCG AGAGTGAGCT TGGCCTTGGC GAAGTGCAAT ACACAGGTTT TGGCATGAAT
GCCGGCTATC CATTGACTGA ACATCTGCTA TTGAACGGAT TTTTGGGCAT GGACTGGCGT
GATACCACCC AGTTTGGCAG CAACTCCGGC GTCAGCCGCT GGACCGGCGA AAACCGGGAT
GAGCATACAT CCGCCAGCCT TGGGCTGAAA TGGCAAAACC TGATGGACAA CAAACTCAGC
CTAGGGCTCG ACTATGGTTA CAGCGATGGC AACAGTGACA CCGAAGTCAG CCTGGGCCTG
TCAAACATCT ACGGTCCCTA CAGCGCAACC CGCCATAACG TCAGTGCTTA TGCCAATTAC
CAGCTCAGCG ATGCCATGTC GCTCCGCATC GATTGGCTTT ATGAGAACTA CAGCGACATG
GATTGGGGCA ACGACGGACT CACACCGGAC AGCATACCCA ACCTGATCCT GCTTGGTTCA
CTGAGCCACG ATTATCAGGC GCACTATCTC GGATTCAGTT TCAGTTATCA GTGGTAA
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| Protein sequence | MKPHFSPTLS LIASAILLGM SGQVLAGYGL KDANRSTVKK EAWVCKGCEI KSESTSAITA
GVAWQDGENS HFANTTGTDA DGATGFVSAD IQHRGDKDYR LDFQADKLGF DASSARLAIK
KPGHYQFYLD YRALARYDTN QGVTPYSAEG DLLVLPDNWQ TAGTTAGMTR LQDAHTVKLE
KKRQRFELGG AVTGDSFTSE LNFRHETREG AQRSSVNLLT NAAMVAKPID DSTDTLDAKV
YWRGDRFLGG INGQISKYSN DHQRLAFDNA FYPTFGAAYN GQMAVDPDNQ AFSLGTDLQF
FEGAQQAIMR ARFSHLTQDE PLLNATVTGP SPALPVMSPD TQVDLMELGL AYSNRLSREF
SVRASYDFRD RDNKTPEYLY PLVTTDSIYR GEYYNKGYDR TRQLLKLGAK YRFSRQWDLD
TLYRYDHNSY SELSRDSVFE NHVEATVRGQ IMAGWRVSLK GEVSARRGDS YQTSSNTQMP
NQSAMRQYFL ADRDKRELRL MTDHYFADVS LQFNVHSGNE DYSESELGLG EVQYTGFGMN
AGYPLTEHLL LNGFLGMDWR DTTQFGSNSG VSRWTGENRD EHTSASLGLK WQNLMDNKLS
LGLDYGYSDG NSDTEVSLGL SNIYGPYSAT RHNVSAYANY QLSDAMSLRI DWLYENYSDM
DWGNDGLTPD SIPNLILLGS LSHDYQAHYL GFSFSYQW
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