Gene Sama_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1127 
Symbol 
ID4603379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1375942 
End bp1376256 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content47% 
IMG OID639780474 
Producthypothetical protein 
Protein accessionYP_927004 
Protein GI119774264 
COG category[S] Function unknown 
COG ID[COG4323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.958574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTG AGTTTCACAG TTTCAGCGAG TTTTACCCCT ATTATCTCAG TGAGCACACC 
CATCCGCTTT GCCGCGCATT ACACTACCTG GGATCATCCT TGGTGCTGTT ACTTCTGCTT
ATTCTGTTGA TTTCAGGTGA GTGGCAGTGG GCCTGGTTAT TGCCGGTAGT GGGGTATGGG
TTTGCCTGGA TAGGGCATTT TTTTATTGAA AAAAACCGTC CTGCGACATT TCGTTATCCC
TGGTACAGCT TTCTGGGTGA TTGGGTAATG CTGTGGGATT TTATTTCCGG CAAAAAACGC
CACAGATGTG ACTGA
 
Protein sequence
MKPEFHSFSE FYPYYLSEHT HPLCRALHYL GSSLVLLLLL ILLISGEWQW AWLLPVVGYG 
FAWIGHFFIE KNRPATFRYP WYSFLGDWVM LWDFISGKKR HRCD