| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1114 |
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| Symbol | |
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| ID | 4603366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1357155 |
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| End bp | 1359218 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639780461 |
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| Product | omega-3 polyunsaturated fatty acid synthase PfaB |
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| Protein accession | YP_926991 |
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| Protein GI | 119774251 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR02816] PfaB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCAG TGAAGACGCC CCCCCTGAGA TTGGCGCTGT GCCGGGTGCA ACGCTGCCCG
AACGATGCCG TAAGGATCAC CGCCAGCGAA CCCGACTGGC ACGCCCTGAT TGAAGAGGCA
CAAAAGGGTT CAACCATCGC ACTGGGTGAA GACGGCACCC TGCTGATGCT GCCGGCACTG
GAGGCCGCCA AACAGCGCCT GCATCCGCTG GCACTGCTGC AGGCCCTGGG TTCGGGCAAA
AATGCCATTC ACACCGCCCT TGCTCAGGCC GGGCGCGCCC CGGCGGATGC GGAAATTCTC
TTTGAACCCG TCACGCTGGA ATGCGTTATC CGCCACGCGG AGCAACTGGC CAGCCGAACC
CATCCGGTAT ACGGCAATTA TTGGAGCCAC CCTCGCTATC AGGCGCGGGT CGTGGCGTTG
GTGAACACCC CGGACCAGTC CGGTAACGAC CAGTCCAGTA CTGATGCAGT AAGCAGCAGG
ATGGCCGGCG GCGACACCCT GGTACTCACC CAGGGTTCGG CGCGGCTGAC ACTGGGTCTC
AACGGCCCCG AATCAGCCCA TAACAGCCCC AACACCCTGG TAGCAAATGC GCTGCCCTGG
CTGCTGCCAC TGGCGTTGCC CAATGCCGAT TGGTCCCATA TTCAACGGCG ACTTACCCAG
GTACAGGCAA GCCTCAATGC CATCAAGGAT AACTCGGCAA AGGGCCAGGC GGCGCTGGCC
AAACTCATTG CCGATGCCGT CGATGAGATG ACCCCGGGCT GCCGGGCGCT GGTGCTGGTT
GGCGACACGG CCAAGGCCCT GGCCGCCGAG GCCGCCGCCC TCTCCTGGCG GATAGCAGAA
AGCCTGCGGG ACGACATTGA ACTGGTAACC CCGGCTGGCA GCGTGTTTGC TCCGAGCCCT
GCCACGGCCG ATGGGCTCGC CTTCGTTTAC CCCGGTGTGG GCGTGGCCTC AGCCTCCATG
CTCTCAAGCC TGCACCTGCG CTTTGCCGAC AGTTTTGATG CCCTGGATCA GCAGAGCCGC
GAGCACGGGC TCGACGGCCT CAATGCCCTG CTGCAGCCAA GAGAGCTGGA AGACAACCCC
AGTCTCGCCG AACAGGCCGT GGCCGGCGTG GGCGCCAGCT ACCTGATGGC CCGTATCCTG
ACGACAGAGC TTGGCCTCAA ACCTGCCATT GCCCTTGGGT ATTCCATGGG CGAAGCCGCC
ATGGTGGCCA GCCATGGTCT GTGGCAAGAC CCCTTTGCCA TGGCGCACGA TACCCTCGAG
AGCGAACTCT TCAACGAGCA GATCTCAGGT GAGCTCAAGG CCGTGCGGGC CCTGTGGCAG
CTGGATGAGG AAACGCCCCA GGACAACCCG GCACCAAAGG CGGCTAAATC CCGCGCCCGT
AAAAAAGCCG CAGCCAGCAA CGCGCTCAAG TGGCAAAGTG CCGTAGTAAG GCTCAGCGCC
GAGGAAATAC GCCCCCATCT GGCAGACTTC CCCCGGGTCA GCATTGCCAT CGCCCAGGGC
CCCAGCACTG TGCTTGCCGG AGACGAAACC GAGCTTAAGC ACCTGTGCAA GACCCTTGGC
AAACGGCCAC TCACCACAGG GCTTGTTACT GCCATGCACA CCCCGGCTGC TGCCGCCATC
AAGGCGCAGC TCAAGGCATT TTATCTGCGA CCACTGGCAC AAGTGTCCGG CGACGCCAGG
GCAGCTTTGC CTGTGATGCT CAGCGCTGGC ACCGATACGC CGCTGCAATT GGCAGACGAG
TGTCAACCAG ACGCGGTTGC CCATGCCATC GCCACCACCT TCAGCGAGCC GCTGGACTTC
ACGGCTCTGG TGCTTCGTGC CGCCAAGGCC GGTGCCAGAC TCTTTGTGGA GGTGGGCGCC
GGACGGCAAA CCAGCGGCAT CATTCAGGCC ATTGCCGACG CCCGCCTGAT GCGCCTCAGC
GCCCATCCCT GCGACGGTCA GGATGGCAAG GCGCTGCAAA AAACCCTGGC ACGCCTCATT
GCCCACAGTA TTCCGATGAA TTTATCCCGC CTGCGCCCTG CCATTGCAGA CGCGCCGCGC
GCCGCCCAAG AGACAACGCC TTGA
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| Protein sequence | MMSVKTPPLR LALCRVQRCP NDAVRITASE PDWHALIEEA QKGSTIALGE DGTLLMLPAL
EAAKQRLHPL ALLQALGSGK NAIHTALAQA GRAPADAEIL FEPVTLECVI RHAEQLASRT
HPVYGNYWSH PRYQARVVAL VNTPDQSGND QSSTDAVSSR MAGGDTLVLT QGSARLTLGL
NGPESAHNSP NTLVANALPW LLPLALPNAD WSHIQRRLTQ VQASLNAIKD NSAKGQAALA
KLIADAVDEM TPGCRALVLV GDTAKALAAE AAALSWRIAE SLRDDIELVT PAGSVFAPSP
ATADGLAFVY PGVGVASASM LSSLHLRFAD SFDALDQQSR EHGLDGLNAL LQPRELEDNP
SLAEQAVAGV GASYLMARIL TTELGLKPAI ALGYSMGEAA MVASHGLWQD PFAMAHDTLE
SELFNEQISG ELKAVRALWQ LDEETPQDNP APKAAKSRAR KKAAASNALK WQSAVVRLSA
EEIRPHLADF PRVSIAIAQG PSTVLAGDET ELKHLCKTLG KRPLTTGLVT AMHTPAAAAI
KAQLKAFYLR PLAQVSGDAR AALPVMLSAG TDTPLQLADE CQPDAVAHAI ATTFSEPLDF
TALVLRAAKA GARLFVEVGA GRQTSGIIQA IADARLMRLS AHPCDGQDGK ALQKTLARLI
AHSIPMNLSR LRPAIADAPR AAQETTP
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