Gene Sama_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1079 
Symbol 
ID4603331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1307198 
End bp1307464 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content45% 
IMG OID639780426 
Producthypothetical protein 
Protein accessionYP_926956 
Protein GI119774216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000245591 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.673952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAGAGA TGTTCAAGTC AGTCACAAGT GCCTGTTCAA TGCGCCAGCA ACAAGCCTAT 
GCTGAAAGGG AGAATGATGA TGAACTTTAC CCATGCAGCT GTCGATTGAT GTCGACTGCA
AAAATTCGGT TCACTTATTC AGACCGGGCC TTTTTCAAGA AGTTCATCGT CAGCGTAAAA
AATTCAAAAA AAATTTTTCC CGGTGCAAAA GTCAATTATC CCGGTGGCCA TCCCGGTGGC
GATTATGACC TGTCACTGCA CATTTGA
 
Protein sequence
MPEMFKSVTS ACSMRQQQAY AERENDDELY PCSCRLMSTA KIRFTYSDRA FFKKFIVSVK 
NSKKIFPGAK VNYPGGHPGG DYDLSLHI