| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1024 |
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| Symbol | |
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| ID | 4603276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1238214 |
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| End bp | 1238996 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639780363 |
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| Product | SPFH domain-containing protein/band 7 family protein |
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| Protein accession | YP_926901 |
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| Protein GI | 119774161 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.584692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAGG TTATCTCAAG TCTGCAGGTG TCTTTCAGCC TTGTGGTGTT GCTGTTACTG
CTGCTAATTA TTTCGATGTT TCGCATCCTG CGTGAATATG AGCGGGCGGT GGTCTTTATG
CTGGGGCGTT TTTACCGTGT CAAAGGACCC GGGCTTATCA TAGTTATCCC TGTGATCCAG
CAAATGGTGC GGGTTGACTT ACGCACAGTA GTGATGGATG TGCCATCTCA GGATGTGATC
AGCCGCGACA ATGTGTCTGT GAGGGTTAAT GCGGTGCTCT ATTTTCGGGT TGTCGATCCC
CAGAAGGCCA TTATCAACGT GGAAGACTTC TTGAGCGCGA CCAGTCAGCT CGCCCAGACC
ACGTTGAGAT CGGTATTGGG GCAACATGAG TTGGATGAAA TGCTGGCCAA TCGCGACATG
TTGAATGCCG ATATCCAGCG GATATTGGAC TCACATACGG ATGTTTGGGG GATTAAGGTC
GCCAATGTGG AAATCAAACA TGTCGACCTC AACGAGACCA TGATCAGAGC CATTGCCCGC
CAGGCCGAAG CTGAGCGGGA ACGGCGAGCC AAGGTGATCC ATGCCCTGGG TGAGCTTGAA
GCATCGGAGC AATTGGTCGC CGCTGCGGCC AGGCTATCAC AGGAGCCAAA CGCCTTATTG
CTGCGTTATC TGCAAACCCT GACCGAAGTG GCCGGTGAAA ATAACTCCAC CATACTCTTC
CCCCTGCCGA TTGAACTGCT CAATCATCTC AGTGGTTTAA CATCGTCAAA GACACAGCAA
TAA
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| Protein sequence | MNEVISSLQV SFSLVVLLLL LLIISMFRIL REYERAVVFM LGRFYRVKGP GLIIVIPVIQ
QMVRVDLRTV VMDVPSQDVI SRDNVSVRVN AVLYFRVVDP QKAIINVEDF LSATSQLAQT
TLRSVLGQHE LDEMLANRDM LNADIQRILD SHTDVWGIKV ANVEIKHVDL NETMIRAIAR
QAEAERERRA KVIHALGELE ASEQLVAAAA RLSQEPNALL LRYLQTLTEV AGENNSTILF
PLPIELLNHL SGLTSSKTQQ
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