| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0980 |
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| Symbol | |
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| ID | 4603232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1184060 |
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| End bp | 1186438 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780319 |
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| Product | hypothetical protein |
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| Protein accession | YP_926857 |
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| Protein GI | 119774117 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.218662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGA CCGAACATTC AGCACTGATA GAACAGCTCA AACCCCTGAT GTTGGAACCC
AACTTCCCGC AGGTGTTCGA GCAGTTGACT GCGGGAGAGT CCAACTCGAC CCGCTTTTTG
CTGAAAATGG AATTAAATCG CCTCGGCTCA GAGTGCACCC GTCTGATTGA TTTGCGTGAC
AAATCTGAAT TGCCCTGTGA AGAGCTGCGT GCGGGGCGTC AAACCCATTT CCTCGACCAG
CCAGCCAAAC AGATTTTCCA GCAGGCGCTG GCCCTGTATC AGGGCAAATA CACCCTTGGC
GTGTATGAAG AGGTGATGAA CGCCCATCGT AAACGCCGGC AAAAATCCCA GGGAAATCCC
TCAGCCGTTT CCCCTGCAGA ATCTCAGCCA TTTACTGTGC CGGGCATAGT GCTTGGCAAC
TATTTCAGCC GCACCGAAGA GCGGATGAAT TACAGCATGA AAATTCTGGT GTCCCAGCCG
GGGCGAGGTG AAATCCCCGG GATCACAGCC GATCTGTCGG TGGGTGGTGC CCGCATACGA
TTGCCGTCGA GACACCCGTT TTCCCTCGAC ATACCTTTAA AGGTAAAACT GGTTGAGCTC
AGCCAGGAGT TTTATTACGA AGATCTGCAG CATGGGGTGG AATATCAGAT AGTCAGTGCC
GAAGGCAATG GCGAATTTAC CTGGATGCGA CTCAAGCGAC TTGGCGGCTC TGAAGGCCTG
TCAGAGATGC TCGCCAATCT CATTCGTGGC TATAAGTTTC GCTACAAGGT TGATATCAAC
GACGTGCTGG TCACGGCCAC AGGTCTTGGG TTTGAGCGCC ATTACCTGCC TCATTTACCA
CATTTACCGC TGTTTCTGGA CAACCGGGGC GATAAACCCA GGTTAAGCCA TTTATTGTTA
AGTCCTGATA ATCAGGCAAT TTTGCATTAT TTCCAGGATG AGAACGACAT CAGCCAATTG
GAAGGCATGT TGACCCAAGG CCGAATGGGC ATGGCACTTC GTTATCCCGA AGACGCCGAT
CACCGCACCT TTTTTTGCTT CACCCATAAT GCCAACGGCA AACTGTTTTT CTATTCAGCT
ACCCTCGCGG AGCTCAAACA CCGTAAAGAG CGGGAGCTCT TTTTCGGTTT CGGTGCAGGT
AAACCCAGTT GGCGGGTGTT TAAGTTAACC CTGGATACCA TAGACCACGG CAAGCGATAC
AAAAGTTCGG TGATCCCCGG AGACGCGGAA AACTATTCCG CCCTGACAGA GCAGCAGCTC
GCCAGCTTCA GCCACGTGCT GCAGTTGATG GACCTGACCC ACGAACCGGC CAAATCGCAA
TATAAAGGCT GGTATAACAA TGCCAACGCC AACGCGCTTA AAGTCTATGG TCAAAAGAAG
GCTGTTCAAA GCAGCATTAA ACAGGTGTCA CTGGAATTCA GCGAGCGGCG ACGGGAGGCC
AGGTTTGCCT TTAAAACCCT GGCAGAAATT CACCAGGGCG GTTTGAAGGT ACAGGGACTG
AGTAACGACA TTTCAAGTCG TGGACTACAG GTGATATTGG ATAAGGCCGC AGCCTTTGAA
GAAGGTAAGC CGGTGACGCT GTCGCTGCCA AAGCTGCAGG CGATTGCCGG TAAAAGTCGC
TTGGTCGACC TGCCCTATCG CCTGGTGAAA TCACGCAAGG ACGGCATGGT ACTGCACCTT
GCCGCCATCA TTGGCCATGA AGTGCATCCC GGGGTCGAGT TTCTCAACAA GCTGATTGTC
CACAATCGGG AGAAGCTGAC CCAGCTGAGC GAAAACAACA GCGACATTAA AGAGCTGTCG
GACGGTCTGA AAAATCTGGT GATGCGAAAG CTGTATGGCG TACCTTTCTT TATCGAAAAA
ACCGCCAAGA CTCAGGTTGT CAGCTTCCTC GGTACCAGCG TGCAGGGCCA TGACATAACC
GACATGTTTG CCGCGCTGAG CACTGAGCCC CAGCACTATA ATCTGGCACC TCTGCTTGGC
AATGGCATAC TGAAACAGGC TGTACTGGAC CCCATACGAA CCCTGCGCCC TAACGATGAA
ATGAGCTACG TTGAGCTGTT TGTCCAGGTC ATACGTCAGT CCCGTGGCGG CATACTGCTG
AAGTTTGTCC CTTCAGACGA TCTGGCATCG GTCGAGGCGC AACTGAACTT TATCAACCAG
AGTAATCAGG TGGGTAAGTT TATGGCTATC CGTCTTTACC GCGGTGCCAC AGGCAAACCA
GACAACAGCT GTATTCGCCG CGAGCTGGAA TACATACACA TACACGCGCA GCACAAGGCC
AAGCAACTTG AAGAGCAATT GTGGCGCATT GTCGGTGTAG GTGAATTATT GGATGTCACA
GACGAAGTTG TGCTGCGTTT CAGCGCACTC AGTCAGTAA
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| Protein sequence | MSLTEHSALI EQLKPLMLEP NFPQVFEQLT AGESNSTRFL LKMELNRLGS ECTRLIDLRD
KSELPCEELR AGRQTHFLDQ PAKQIFQQAL ALYQGKYTLG VYEEVMNAHR KRRQKSQGNP
SAVSPAESQP FTVPGIVLGN YFSRTEERMN YSMKILVSQP GRGEIPGITA DLSVGGARIR
LPSRHPFSLD IPLKVKLVEL SQEFYYEDLQ HGVEYQIVSA EGNGEFTWMR LKRLGGSEGL
SEMLANLIRG YKFRYKVDIN DVLVTATGLG FERHYLPHLP HLPLFLDNRG DKPRLSHLLL
SPDNQAILHY FQDENDISQL EGMLTQGRMG MALRYPEDAD HRTFFCFTHN ANGKLFFYSA
TLAELKHRKE RELFFGFGAG KPSWRVFKLT LDTIDHGKRY KSSVIPGDAE NYSALTEQQL
ASFSHVLQLM DLTHEPAKSQ YKGWYNNANA NALKVYGQKK AVQSSIKQVS LEFSERRREA
RFAFKTLAEI HQGGLKVQGL SNDISSRGLQ VILDKAAAFE EGKPVTLSLP KLQAIAGKSR
LVDLPYRLVK SRKDGMVLHL AAIIGHEVHP GVEFLNKLIV HNREKLTQLS ENNSDIKELS
DGLKNLVMRK LYGVPFFIEK TAKTQVVSFL GTSVQGHDIT DMFAALSTEP QHYNLAPLLG
NGILKQAVLD PIRTLRPNDE MSYVELFVQV IRQSRGGILL KFVPSDDLAS VEAQLNFINQ
SNQVGKFMAI RLYRGATGKP DNSCIRRELE YIHIHAQHKA KQLEEQLWRI VGVGELLDVT
DEVVLRFSAL SQ
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