| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0970 |
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| Symbol | |
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| ID | 4603222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1173084 |
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| End bp | 1173866 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639780309 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_926847 |
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| Protein GI | 119774107 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0121971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000171959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGACGGCAT CCCTGAGGCT CATTGACAGC CATGCACATC TGGATTTTCC TGAGTTTGAC
TCCGACCGAG ACGCAGTGTT TGCGGCCATG TCAAAGGCTA ACATCTCGAG CTGCATTATT
CCCGGTGTTT CTCCTGCCCA TTGGGACAGG CAGCTTCAGG TTGCCCATCA ATATGCCTGT
TCTTATGGAT TGGGTCTGCA TCCCTGGTAT GTGGATGCCA ATTGGCAGAG CGCCATAGAC
GATTTATCAG AACGATTGGA CCGCCACCGC AGTGATAAGA AGTTGGTTGC TGTGGGTGAA
TGTGGTCTCG ATAAGATCCG CGATAATAAC TGGCAATGGC AGCTGCAGGC GTTAGAAGCC
CAGTTGTTGC TTGCCAGCAA ACATCAATTG CCGGTTATTC TCCATAGCGT TAAATCTCAC
GAACCACTGA TTTCCCTGCT TTCCAGTCAT TCGTTACCCC GCCGCGGTGT GATACATGGT
TTTTATGGCA GCGTTGAAGT AGCCAAGCGC TATATTGAGC TGGGATATCT ACTGGGGATT
GGTGGCTTAT TGTTGAATGA GGATGCAAAA AAGCTGCATA AAGTTGTTGA AACATTACCG
ATAGAAAGTT TCATTTGCGA GACAGATTCG CCCTCAATGG CACCCAAAAG TGCTAGAGGA
AGTCGTAATT CTCCCCTTTT AATTGGTCAA ATTGTCACCA AAATGGCCCA TTTGCAAAAA
AAATCCAATG TTCTAATATC AGAACGACTG TTAAGCAATG TGTCGCAACT GTTTGAGCTA
TAG
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| Protein sequence | MTASLRLIDS HAHLDFPEFD SDRDAVFAAM SKANISSCII PGVSPAHWDR QLQVAHQYAC
SYGLGLHPWY VDANWQSAID DLSERLDRHR SDKKLVAVGE CGLDKIRDNN WQWQLQALEA
QLLLASKHQL PVILHSVKSH EPLISLLSSH SLPRRGVIHG FYGSVEVAKR YIELGYLLGI
GGLLLNEDAK KLHKVVETLP IESFICETDS PSMAPKSARG SRNSPLLIGQ IVTKMAHLQK
KSNVLISERL LSNVSQLFEL
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