| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0962 |
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| Symbol | rbfA |
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| ID | 4603214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1163813 |
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| End bp | 1164226 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780301 |
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| Product | ribosome-binding factor A |
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| Protein accession | YP_926839 |
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| Protein GI | 119774099 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0858] Ribosome-binding factor A |
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| TIGRFAM ID | [TIGR00082] ribosome-binding factor A |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.394859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0786715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGAG AATTTAGTCG TACCCGCCGC ATCGGTCAGC AGCTGCAACA GGAGCTGGCC
TTTGTACTGC AGCGGGACAT GAAAGATCCT CGCATCGGCA TGGTAACCGT CAATGACGTG
GATGTATCCC GCGATCTGAG CCACGCCAAA GTATACGTGA CCTTTTTCGA GGAAGATCCT
CAAGTTATCG AAGCCAAGCT GGCAGCCCTG AATACGGCTG CACCTTATGC CCGTACTCTG
GTGGCTGGTC GCATGAAGCT TAGGGTCATG CCTGAGCTGC GCTTTATCTA CGATGCGTCT
CTGGTTGAAG GTATGCGCAT GTCAAACCTG GTGAGTAAGG TCATTCGTGA CGATGAGGCC
AAGAAAGGTC ACATTGGCGA TGAACCCCAG GAAGGGCAGC GCGAGGAAGA CTGA
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| Protein sequence | MAREFSRTRR IGQQLQQELA FVLQRDMKDP RIGMVTVNDV DVSRDLSHAK VYVTFFEEDP
QVIEAKLAAL NTAAPYARTL VAGRMKLRVM PELRFIYDAS LVEGMRMSNL VSKVIRDDEA
KKGHIGDEPQ EGQREED
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