| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0946 |
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| Symbol | |
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| ID | 4603198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1145587 |
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| End bp | 1146720 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780281 |
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| Product | N-acetylglucosamine-6-phosphate deacetylase |
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| Protein accession | YP_926823 |
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| Protein GI | 119774083 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
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| TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.048335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACGA CCCTTATCGC CGAGCGCCTG TTTGATGGCG AGCAGTTTCA CCACAATGTG
CCTTTGACTG TGGAAGACGG CCAGGTGTTG GCCCTCGATA CTGTCGCCGG CTGCGCCGAG
GTAAGATTGC AGGGCACCCT GGTGCCCGGT TTTATCGATG TGCAGGTTAA TGGTGGTGGC
GGTGTGCTTT TTAACGACAC CCCAACCGTG GCTGCCATTG AGGCCATTGG GGCGGCGCAT
GCCCGCTTTG GCACCACAGG TTATTTGCCG ACGCTCATCA CCGATAAGGT AGAGACCATG
GCCCGGGCCG CCGATGCGGC CGCAGAGGCT ATCGCCAAAG GATCCACCGG GGTGCTCGGG
GTTCACTTTG AGGGGCCGCA TTTGTCGGTA CCCAAAAAAG GCGTGCATCC CGAGTCGCAC
ATTCGCCGTA TCGGCGATCG CGAACTGGAG ATTTTTGCCC GTCAGGATTT GGGGCTAAAG
GTAGTGACCC TGGCGCCTGA GAATGTGTCT CCTGAGGTGA TCTGCGCTCT GGTCGATGTG
GGAGTCAAGG TCTGCTTGGG CCACTCCAAT GCTGATTACG CGACCACTGT CGCGGCGCTG
GAAGCCGGTG CCACCGGTTT TACCCACCTT TATAACGCCA TGTCGGCGCT CACTTCCCGA
GAGCCAGGCG TTGTCGGCGC TGCCATCGAC AGTGATGAAG CCTGGTGCGG TTTGATTGTT
GACGGTCACC ACGTGCATTC GGCGGCGGCC CGTATTGCTA TCAAGGCCAA GCCCCGCGGC
AAGGTGATGT TGGTGACCGA TGCCATGCCT CCGGTTGGCA TGGATGATAA CGCCAGCTTT
GAACTCTTTG GTATTCAAGT GGTACGTCAG GGGGACAAGC TTAATGCCCT GACCGGAGAG
CTTGCCGGCT GCGTGTTGGA CATGGCTGGT GCAGTGCAAA ATACAGTCGA CATGCTGGGA
CTGCCTCAGG CCGAAGCCAT TCGCATGGCA TCACTTTATC CTGCCGCCTT CCTTGGTATC
GACAACAGGG TGGGAACCCT GAGTGTCGGT AAGCAAGCCG ATATGGTACT GCTCGATGAT
AACGGCCGTT GCCGCGGAAC CTGGATTGGC GGTAGGCAGG TGTTTGGCCT GTGA
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| Protein sequence | MKTTLIAERL FDGEQFHHNV PLTVEDGQVL ALDTVAGCAE VRLQGTLVPG FIDVQVNGGG
GVLFNDTPTV AAIEAIGAAH ARFGTTGYLP TLITDKVETM ARAADAAAEA IAKGSTGVLG
VHFEGPHLSV PKKGVHPESH IRRIGDRELE IFARQDLGLK VVTLAPENVS PEVICALVDV
GVKVCLGHSN ADYATTVAAL EAGATGFTHL YNAMSALTSR EPGVVGAAID SDEAWCGLIV
DGHHVHSAAA RIAIKAKPRG KVMLVTDAMP PVGMDDNASF ELFGIQVVRQ GDKLNALTGE
LAGCVLDMAG AVQNTVDMLG LPQAEAIRMA SLYPAAFLGI DNRVGTLSVG KQADMVLLDD
NGRCRGTWIG GRQVFGL
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